RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 PIP4P1Q86T03 277 aa10.66□□□□□ -0.7
UBE3A-224ENST00000635914 HIST2H2BDQ6DRA6 164 aa10.66□□□□□ -0.7
UBE3A-224ENST00000635914 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
UBE3A-224ENST00000635914 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
UBE3A-224ENST00000635914 COL4A6Q14031 1691 aa10.65□□□□□ -0.7
UBE3A-224ENST00000635914 I3L2K1 104 aa10.65□□□□□ -0.7
UBE3A-224ENST00000635914 GATA1P15976 413 aaPredicted RBP10.65□□□□□ -0.7
UBE3A-224ENST00000635914 WIPF3A6NGB9 483 aa10.65□□□□□ -0.7
UBE3A-224ENST00000635914 IGHV4-38-2P0DP08 117 aa10.65□□□□□ -0.71
UBE3A-224ENST00000635914 K7EIM0 57 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 DHRS4-AS1Q9P1J3 65 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 DAND5Q8N907 189 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 TCL1BO95988 128 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 REG3AQ06141 175 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 UQCRQO14949 82 aa10.64□□□□□ -0.71
UBE3A-224ENST00000635914 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
UBE3A-224ENST00000635914 CTSGP08311 255 aa10.63□□□□□ -0.71
UBE3A-224ENST00000635914 LOXL1Q08397 574 aaPredicted RBP10.63□□□□□ -0.71
UBE3A-224ENST00000635914 FAM236DA0A1B0GTK5 79 aa10.63□□□□□ -0.71
UBE3A-224ENST00000635914 FAM236CP0DP71 79 aa10.63□□□□□ -0.71
UBE3A-224ENST00000635914 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
UBE3A-224ENST00000635914 A0A0J9YXV3 536 aa10.62□□□□□ -0.71
UBE3A-224ENST00000635914 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
UBE3A-224ENST00000635914 DAZAP2Q15038 168 aaPredicted RBP10.62□□□□□ -0.71
UBE3A-224ENST00000635914 CLEC2BQ92478 149 aa10.62□□□□□ -0.71
UBE3A-224ENST00000635914 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
UBE3A-224ENST00000635914 RPL39P62891 51 aaKnown RBP10.61□□□□□ -0.71
UBE3A-224ENST00000635914 TRAV23DV6A0A075B6W5 121 aa10.61□□□□□ -0.71
UBE3A-224ENST00000635914 SPATA12Q7Z6I5 190 aa10.61□□□□□ -0.71
UBE3A-224ENST00000635914 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
UBE3A-224ENST00000635914 WFDC10BQ8IUB3 73 aa10.61□□□□□ -0.71
UBE3A-224ENST00000635914 IGHV4-61A0A0C4DH41 118 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 A6NED7 52 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 RNF185Q96GF1 192 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 RNF144BQ7Z419 303 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 IGKV1-17P01599 117 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 Q8N9W7 124 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 PRYO14603 147 aa10.6□□□□□ -0.71
UBE3A-224ENST00000635914 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 COX17Q14061 63 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 DIAPH2-AS1Q14236 149 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 ARTNQ5T4W7 220 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 NDUFV3P56181 108 aaKnown RBP10.59□□□□□ -0.71
UBE3A-224ENST00000635914 IGLV3-1P01715 115 aa10.59□□□□□ -0.71
UBE3A-224ENST00000635914 FAM19A1Q7Z5A9 133 aa10.58□□□□□ -0.71
UBE3A-224ENST00000635914 MIFP14174 115 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 ODF1Q14990 250 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 ASPHD1Q5U4P2 390 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 DNAJC9-AS1A6NH13 148 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 A0A0J9YXY3 114 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 MUC7Q8TAX7 377 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 SPRY4Q9C004 299 aa10.58□□□□□ -0.72
UBE3A-224ENST00000635914 A0A0J9YX75 114 aa10.57□□□□□ -0.72
UBE3A-224ENST00000635914 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
UBE3A-224ENST00000635914 LINC00322Q6ZN03 302 aaPredicted RBP10.57□□□□□ -0.72
UBE3A-224ENST00000635914 C1orf147Q96MC9 270 aaPredicted RBP10.57□□□□□ -0.72
UBE3A-224ENST00000635914 BLCAPP62952 87 aa10.57□□□□□ -0.72
UBE3A-224ENST00000635914 Q8N9L7 120 aa10.57□□□□□ -0.72
UBE3A-224ENST00000635914 PROK2Q9HC23 129 aa10.57□□□□□ -0.72
UBE3A-224ENST00000635914 COA6Q5JTJ3 125 aaKnown RBP10.56□□□□□ -0.72
UBE3A-224ENST00000635914 LY6G6EA0A0G2JKS1 128 aa10.56□□□□□ -0.72
UBE3A-224ENST00000635914 U3KQA8 63 aa10.56□□□□□ -0.72
UBE3A-224ENST00000635914 MPLKIPQ8TAP9 179 aa10.56□□□□□ -0.72
UBE3A-224ENST00000635914 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
UBE3A-224ENST00000635914 IGKV1D-37A0A075B6S9 117 aa10.56□□□□□ -0.72
UBE3A-224ENST00000635914 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
UBE3A-224ENST00000635914 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
UBE3A-224ENST00000635914 CTSZQ9UBR2 303 aa10.55□□□□□ -0.72
UBE3A-224ENST00000635914 CHCHD10Q8WYQ3 142 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-224ENST00000635914 ESM1Q9NQ30 184 aa10.54□□□□□ -0.72
UBE3A-224ENST00000635914 G3V4G9 280 aa10.54□□□□□ -0.72
UBE3A-224ENST00000635914 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
UBE3A-224ENST00000635914 FXYD2P54710 66 aa10.54□□□□□ -0.72
UBE3A-224ENST00000635914 IGFL2Q6UWQ7 119 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-224ENST00000635914 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 WFDC11Q8NEX6 87 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 DEFB4AO15263 64 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 IMUPQ9GZP8 106 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 LRRC75A-AS1Q8N1F1 130 aa10.53□□□□□ -0.72
UBE3A-224ENST00000635914 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
UBE3A-224ENST00000635914 UBE2D2P62837 147 aa10.52□□□□□ -0.73
UBE3A-224ENST00000635914 TRAV10A0A0B4J240 114 aa10.52□□□□□ -0.73
UBE3A-224ENST00000635914 CCKP06307 115 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 P0DMU3 169 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 FAM231AP0DMU4 169 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 FAM231CP0DMU5 169 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 USP24Q9UPU5 2620 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 C10orf25Q5T742 122 aa10.51□□□□□ -0.73
UBE3A-224ENST00000635914 KRTAP27-1Q3LI81 207 aa10.5□□□□□ -0.73
UBE3A-224ENST00000635914 C11orf53Q8IXP5 236 aa10.5□□□□□ -0.73
UBE3A-224ENST00000635914 MRPS36P82909 103 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms