RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 ASXL3Q9C0F0 2248 aa4.53□□□□□ -1.68
CHD2-221ENST00000635856 Q8N6K4 173 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 PRR14LQ5THK1 2151 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 TRANK1O15050 2925 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 IGKV3D-20A0A0C4DH25 116 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 ZNF73O43830 326 aaPredicted RBP4.52□□□□□ -1.69
CHD2-221ENST00000635856 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 Q6ZVQ6 151 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 C6orf223Q8N319 242 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 IGHV4-4A0A075B6R2 117 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 LECT2O14960 151 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 RPL36AP83881 106 aaKnown RBP4.52□□□□□ -1.69
CHD2-221ENST00000635856 C17orf82Q86X59 251 aaPredicted RBP4.52□□□□□ -1.69
CHD2-221ENST00000635856 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 LINC00308Q8TCZ7 52 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 RPL36ALQ969Q0 106 aaKnown RBP4.52□□□□□ -1.69
CHD2-221ENST00000635856 TM2D3Q9BRN9 247 aa4.52□□□□□ -1.69
CHD2-221ENST00000635856 PRYO14603 147 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 RPL11P62913 178 aaKnown RBP4.51□□□□□ -1.69
CHD2-221ENST00000635856 CHKB-CPT1BH3BT56 60 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 CNEP1R1Q8N9A8 125 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 CFHR1Q03591 330 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 NREPQ16612 68 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 C17orf58Q2M2W7 97 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 SPTBN4Q9H254 2564 aa4.51□□□□□ -1.69
CHD2-221ENST00000635856 TECTAO75443 2155 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 IGHV3-72A0A0B4J1Y9 119 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 IBA57-AS1B1ANH7 110 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 PLA2G2CQ5R387 149 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 ZNF833PQ6ZTB9 187 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 TET2Q6N021 2002 aaPredicted RBP4.5□□□□□ -1.69
CHD2-221ENST00000635856 IGKV1D-17A0A075B6S4 117 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 TSHBP01222 138 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 IGKV1-17P01599 117 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 Q0VFX4 171 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 VMO1Q7Z5L0 202 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.5□□□□□ -1.69
CHD2-221ENST00000635856 Q9H8V8 135 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 NOTCH4Q99466 2003 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 CFAP47Q6ZTR5 3102 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 SRRM5B3KS81 715 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 M0R378 163 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 SERTAD4-AS1Q5TG53 156 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 PRSS33Q8NF86 280 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 OPRPNQ99935 248 aaPredicted RBP4.5□□□□□ -1.69
CHD2-221ENST00000635856 FREM2Q5SZK8 3169 aa4.5□□□□□ -1.69
CHD2-221ENST00000635856 DKK1O94907 266 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 MED13Q9UHV7 2174 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 PIEZO1Q92508 2521 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 C1orf229Q6ZS94 237 aaPredicted RBP4.49□□□□□ -1.69
CHD2-221ENST00000635856 NKAPP1Q8N9T2 125 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 WDFY3Q8IZQ1 3526 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 PRB3Q04118 309 aaPredicted RBP4.49□□□□□ -1.69
CHD2-221ENST00000635856 LINC00269Q8N2A0 174 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 PSMG3-AS1Q96PY0 264 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 CCL13Q99616 98 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 DCHS1Q96JQ0 3298 aa4.49□□□□□ -1.69
CHD2-221ENST00000635856 IGKV3D-15A0A087WSY6 115 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 IGHV7-4-1A0A0J9YVY3 117 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 K7EMT4 169 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 RNASE4P34096 147 aaKnown RBP4.48□□□□□ -1.69
CHD2-221ENST00000635856 LCA10Q71F78 164 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 GGNQ86UU5 652 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 S4R3C0 116 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 TNCP24821 2201 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 A0A087WWL8 130 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 NDUFA1O15239 70 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 C19orf54Q5BKX5 351 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 APC2O95996 2303 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 Q1T7F1 81 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 Q8N2B8 174 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 C20orf203Q8NBC4 194 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 LITAFQ99732 161 aa4.48□□□□□ -1.69
CHD2-221ENST00000635856 ATRXP46100 2492 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 IGHV1-18A0A0C4DH31 117 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 PCNX2A6NKB5 2137 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 C8orf87E5RJ46 101 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 I3L2K1 104 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 PRB1P04280 392 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 MED14OSP0DP75 135 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 Q8N3U1 123 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 DMXL1Q9Y485 3027 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 IGLV3-12A0A075B6K2 115 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 ZNF503-AS2A6NEH8 195 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 LHBP01229 141 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 GNLYP22749 145 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 MSMPQ1L6U9 139 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 CEP192Q8TEP8 1941 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 A6NED7 52 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 POLR2KP53803 58 aaKnown RBP4.47□□□□□ -1.69
CHD2-221ENST00000635856 CXCL6P80162 114 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 RNASE13Q5GAN3 156 aaKnown RBP4.47□□□□□ -1.69
CHD2-221ENST00000635856 ZNRD1Q9P1U0 126 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 LENEPQ9Y5L5 61 aa4.47□□□□□ -1.69
CHD2-221ENST00000635856 SVILO95425 2214 aa4.46□□□□□ -1.69
CHD2-221ENST00000635856 IGLV4-3A0A075B6K6 122 aa4.46□□□□□ -1.69
CHD2-221ENST00000635856 IGHV4OR15-8A0A075B7B6 117 aa4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms