RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 LINC01551Q86U37 167 aa4.3□□□□□ -1.72
TCF4-266ENST00000628689 TMEM183AQ8IXX5 376 aa4.3□□□□□ -1.72
TCF4-266ENST00000628689 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
TCF4-266ENST00000628689 IGKV2-40A0A087WW87 121 aaPredicted RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 A4D1N5 150 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 M0R2P5 195 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 ZNF253O75346 499 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 IGKV2D-40P01614 121 aaPredicted RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 S100A8P05109 93 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 NBEAP1P0C6P0 100 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 HIST1H1EP10412 219 aaKnown RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 RPS10P46783 165 aaKnown RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 UBE2G2P60604 165 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 CACNG7P62955 275 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 PDE6HQ13956 83 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 ISOC2Q96AB3 205 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 MRPL53Q96EL3 112 aaKnown RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 FAM167A-AS1Q96KT0 104 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 YPEL4Q96NS1 127 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 URGCP-MRPS24S4R325 110 aa4.29□□□□□ -1.72
TCF4-266ENST00000628689 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
TCF4-266ENST00000628689 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 TYMSP04818 313 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 AKR1C3P42330 323 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 RPL35P42766 123 aaKnown RBP4.28□□□□□ -1.72
TCF4-266ENST00000628689 CNBPP62633 177 aaKnown RBP4.28□□□□□ -1.72
TCF4-266ENST00000628689 TMEM78Q5T7P6 136 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 RASL11AQ6T310 242 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 NIT1Q86X76 327 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 OR10G8Q8NGN5 311 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 CMTM2Q8TAZ6 248 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 SLC25A2Q9BXI2 301 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 OTORQ9NRC9 128 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 OSTCQ9NRP0 149 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 NAGKQ9UJ70 344 aa4.28□□□□□ -1.72
TCF4-266ENST00000628689 TRAV34A0A0B4J273 112 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 MUC21A0A0G2JKD1 596 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 TRBV6-1A0A0K0K1D8 114 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GCGP01275 180 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 HLA-DQA1P01909 254 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 MT-ND6P03923 174 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 CSN1S1P47710 185 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 UBE2G1P62253 170 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GAGE1Q13065 139 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GAGE4Q13068 117 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 GAGE5Q13069 117 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 FAM159AQ6UWV7 190 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 EXOC3-AS1Q8N2X6 119 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 OCC1Q8TAD7 63 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 Q8TAT8 98 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 AAMDCQ9H7C9 122 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 ZNF492Q9P255 531 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 C11orf21Q9P2W6 132 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 EPDR1Q9UM22 224 aa4.27□□□□□ -1.73
TCF4-266ENST00000628689 TRBV19A0A075B6N1 114 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 C5orf52A6NGY3 159 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 PEX7O00628 323 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 GNRH2O43555 120 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 CENPWQ5EE01 88 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 CFAP126Q5VTH2 177 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 BAGE2Q86Y30 109 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 IL36BQ9NZH7 164 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 ZFP30Q9Y2G7 519 aa4.26□□□□□ -1.73
TCF4-266ENST00000628689 A0A087WX48 190 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 TGIF2-C20orf24A0A0A6YYL0 155 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 PGPA6NDG6 321 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 TCRAP04437 139 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 S100A2P29034 98 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 ZNF138P52744 262 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 RANP62826 216 aaKnown RBP4.25□□□□□ -1.73
TCF4-266ENST00000628689 Q0VG73 95 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 SAPCD1Q5SSQ6 148 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 GNB1LQ9BYB4 327 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 GFRA4Q9GZZ7 299 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 USH2AO75445 5202 aa4.25□□□□□ -1.73
TCF4-266ENST00000628689 TRBV20OR9-2A0A075B6H5 130 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 A8MWL6 223 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 CIDEAO60543 219 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 EIF3GO75821 320 aaKnown RBP eCLIP4.24□□□□□ -1.73
TCF4-266ENST00000628689 LTAP01374 205 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 TRGC2P03986 189 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 CXCL1P09341 107 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 LINC00694P0DN24 101 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 MGST1P10620 155 aaKnown RBP4.24□□□□□ -1.73
TCF4-266ENST00000628689 SNRPEP62304 92 aaKnown RBP4.24□□□□□ -1.73
TCF4-266ENST00000628689 ZNF876PQ49A33 203 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 COA6Q5JTJ3 125 aaKnown RBP4.24□□□□□ -1.73
TCF4-266ENST00000628689 Q6AWC8 147 aa4.24□□□□□ -1.73
TCF4-266ENST00000628689 ENHOQ6UWT2 76 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms