RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
SGMS1-211ENST00000626236 VCYO14598 125 aa5.86□□□□□ -1.47
SGMS1-211ENST00000626236 POLR2KP53803 58 aaKnown RBP5.86□□□□□ -1.47
SGMS1-211ENST00000626236 COTL1Q14019 142 aa5.86□□□□□ -1.47
SGMS1-211ENST00000626236 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
SGMS1-211ENST00000626236 ALMS1Q8TCU4 4167 aa5.86□□□□□ -1.47
SGMS1-211ENST00000626236 TRBV27A0A0K0K1C4 114 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 TSHBP01222 138 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 FCER1GP30273 86 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 AMTP48728 403 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 TIRAPP58753 221 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 RPL32P62910 135 aaKnown RBP5.85□□□□□ -1.47
SGMS1-211ENST00000626236 IQCJQ1A5X6 159 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 TMEM97Q5BJF2 176 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 LELP1Q5T871 98 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 NTM-AS1Q6ZSK4 140 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 KIR2DL4Q99706 377 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 MRPS16Q9Y3D3 137 aaKnown RBP5.85□□□□□ -1.47
SGMS1-211ENST00000626236 DNAH1Q9P2D7 4330 aa5.85□□□□□ -1.47
SGMS1-211ENST00000626236 VPS13DQ5THJ4 4388 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 TRBV25-1A0A075B6N4 114 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 TRBV6-8A0A0A6YYG3 113 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 TRAV8-6A0A0B4J262 113 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 IGHV1-24A0A0C4DH33 117 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 PRSS47A8MTI9 375 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 TCAPO15273 167 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 LY6G6CO95867 125 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 IFI27P40305 119 aaPredicted RBP5.84□□□□□ -1.47
SGMS1-211ENST00000626236 LGALS9CQ6DKI2 356 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 Q8N8P6 123 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.47
SGMS1-211ENST00000626236 IGLV2-18A0A075B6J9 118 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 WFDC10BQ8IUB3 73 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 PRSS3P2Q8NHM4 247 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 C18orf32Q8TCD1 76 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 LINC00476Q8WZB0 136 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 UPK3BQ9BT76 320 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
SGMS1-211ENST00000626236 NXT2Q9NPJ8 142 aaKnown RBP5.83□□□□□ -1.48
SGMS1-211ENST00000626236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.82□□□□□ -1.48
SGMS1-211ENST00000626236 IGKV2-29A2NJV5 120 aaPredicted RBP5.82□□□□□ -1.48
SGMS1-211ENST00000626236 UBE2L6O14933 153 aa5.82□□□□□ -1.48
SGMS1-211ENST00000626236 GAGE6Q13070 117 aa5.82□□□□□ -1.48
SGMS1-211ENST00000626236 FA2HQ7L5A8 372 aa5.82□□□□□ -1.48
SGMS1-211ENST00000626236 TMEM243Q9BU79 118 aa5.82□□□□□ -1.48
SGMS1-211ENST00000626236 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
SGMS1-211ENST00000626236 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 TMEM262E9PQX1 116 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 SIVA1O15304 175 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 IGHV3-30P01768 117 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 IGHV3-33P01772 117 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 IGHV3-30-5P0DP03 117 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 LAGE3Q14657 143 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 ORMDL2Q53FV1 153 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 RNASEKQ6P5S7 137 aaKnown RBP5.81□□□□□ -1.48
SGMS1-211ENST00000626236 Q9H8V8 135 aa5.81□□□□□ -1.48
SGMS1-211ENST00000626236 A0A087WX48 190 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 C1orf196B1AJZ1 125 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 K7EMI3 77 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 LINC00614P0C842 121 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 ESDP10768 282 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 RAB5BP61020 215 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 Q0VG73 95 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 MPV17L2Q567V2 206 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 NIT1Q86X76 327 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 BAGE3Q86Y29 109 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
SGMS1-211ENST00000626236 LCE6AA0A183 80 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 LINC01546A6NGU7 62 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 H7C423 109 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BKO60814 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BJP06899 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 DNAH10OSP0CZ25 163 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 BTF3P20290 206 aaKnown RBP5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BOP23527 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BBP33778 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BDP58876 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 PKIAP61925 76 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BCP62807 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 RPL39P62891 51 aaKnown RBP5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST2H2BEQ16778 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 LINC01556Q5JQF7 62 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.79□□□□□ -1.48
SGMS1-211ENST00000626236 AMMECR1LQ6DCA0 310 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 C20orf203Q8NBC4 194 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BHQ93079 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BNQ99877 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 HIST1H2BMQ99879 126 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
SGMS1-211ENST00000626236 SACSQ9NZJ4 4579 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 DNAH6Q9C0G6 4158 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 FGF6P10767 208 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 RBX1P62877 108 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 PMCHL1Q16048 86 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 C2orf66Q6UXQ4 117 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 Q8N976 141 aa5.78□□□□□ -1.48
SGMS1-211ENST00000626236 CHCHD1Q96BP2 118 aaKnown RBP5.78□□□□□ -1.48
SGMS1-211ENST00000626236 TMEM101Q96IK0 257 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms