RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 K7EQD1 137 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 PHLDA1Q8WV24 401 aaPredicted RBP9.42□□□□□ -0.9
C3orf56-201ENST00000624688 FAM104AQ969W3 186 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 MPV17L2Q567V2 206 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 SLC25A29Q8N8R3 303 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 TTTY13Q9BZ97 58 aa9.42□□□□□ -0.9
C3orf56-201ENST00000624688 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 IGLV4-3A0A075B6K6 122 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 TRGV2A0A075B6R0 118 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 TRBV10-1A0A0K0K1A3 114 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 JMJD1CQ15652 2540 aa9.41□□□□□ -0.9
C3orf56-201ENST00000624688 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
C3orf56-201ENST00000624688 SIVA1O15304 175 aa9.4□□□□□ -0.9
C3orf56-201ENST00000624688 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
C3orf56-201ENST00000624688 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
C3orf56-201ENST00000624688 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.91
C3orf56-201ENST00000624688 CIDEAO60543 219 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 EMP1P54849 157 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 COL5A1-AS1Q5SY13 56 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 BVES-AS1Q5T3Y7 98 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 COTL1Q14019 142 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
C3orf56-201ENST00000624688 PRIMA1Q86XR5 153 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 UBE2D4Q9Y2X8 147 aa9.39□□□□□ -0.91
C3orf56-201ENST00000624688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
C3orf56-201ENST00000624688 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
C3orf56-201ENST00000624688 UBE2D3P61077 147 aa9.38□□□□□ -0.91
C3orf56-201ENST00000624688 UBE2D2P62837 147 aa9.38□□□□□ -0.91
C3orf56-201ENST00000624688 RPL36AP83881 106 aaKnown RBP9.38□□□□□ -0.91
C3orf56-201ENST00000624688 FHL2Q14192 279 aa9.38□□□□□ -0.91
C3orf56-201ENST00000624688 RPL36ALQ969Q0 106 aaKnown RBP9.38□□□□□ -0.91
C3orf56-201ENST00000624688 AMELXQ99217 191 aa9.38□□□□□ -0.91
C3orf56-201ENST00000624688 TRBV6-4A0A1B0GX49 114 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 GAGE12JA6NER3 117 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 APOC4P55056 127 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 GAGE1Q13065 139 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 GAGE4Q13068 117 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 GAGE5Q13069 117 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 PAPPA-AS1Q5QFB9 102 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 NFE4Q86UQ8 179 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 SPANXA1Q9NS26 97 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 VWFP04275 2813 aa9.37□□□□□ -0.91
C3orf56-201ENST00000624688 LOC100131303A0A0U1RQF7 123 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 E9PLD3 99 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 NPSP0C0P6 89 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 DEFB135Q30KP9 77 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 DAZ4Q86SG3 579 aaKnown RBP9.36□□□□□ -0.91
C3orf56-201ENST00000624688 DAZ3Q9NR90 486 aaKnown RBP9.36□□□□□ -0.91
C3orf56-201ENST00000624688 TEP1Q99973 2627 aaKnown RBP9.36□□□□□ -0.91
C3orf56-201ENST00000624688 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 TRGV4A0A0C4DH28 118 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 CRYBA4P53673 196 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 TMEM97Q5BJF2 176 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 VCX2Q9H322 139 aa9.36□□□□□ -0.91
C3orf56-201ENST00000624688 TRBV25-1A0A075B6N4 114 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 DEFB130BP0DP73 79 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 DEFB130AP0DP74 79 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 C3orf56Q8N813 242 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 PRADC1Q9BSG0 188 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
C3orf56-201ENST00000624688 KRTAP10-11P60412 298 aa9.34□□□□□ -0.91
C3orf56-201ENST00000624688 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
C3orf56-201ENST00000624688 SHISA2Q6UWI4 295 aa9.34□□□□□ -0.91
C3orf56-201ENST00000624688 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
C3orf56-201ENST00000624688 CHAC1Q9BUX1 264 aa9.34□□□□□ -0.91
C3orf56-201ENST00000624688 FLNBO75369 2602 aaKnown RBP9.34□□□□□ -0.91
C3orf56-201ENST00000624688 A0A0J9YXV3 536 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 LINC00694P0DN24 101 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 HSD52Q0P140 79 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 TMEM170BQ5T4T1 132 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 Q6ZUT4 128 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 SBSPONQ8IVN8 264 aa9.34□□□□□ -0.92
C3orf56-201ENST00000624688 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
C3orf56-201ENST00000624688 ATRQ13535 2644 aa9.33□□□□□ -0.92
C3orf56-201ENST00000624688 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
C3orf56-201ENST00000624688 MYMXA0A1B0GTQ4 84 aa9.32□□□□□ -0.92
C3orf56-201ENST00000624688 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
C3orf56-201ENST00000624688 MRPS36P82909 103 aaKnown RBP9.32□□□□□ -0.92
C3orf56-201ENST00000624688 FAM222AQ5U5X8 452 aa9.32□□□□□ -0.92
C3orf56-201ENST00000624688 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
C3orf56-201ENST00000624688 IGHV4-28A0A0C4DH34 117 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 LYRM9A8MSI8 78 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 DEFB4AO15263 64 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
C3orf56-201ENST00000624688 HERVK_113P61574 105 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 Q6ZVH6 145 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 Q8NAQ8 132 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 TMEM223A0PJW6 202 aa9.31□□□□□ -0.92
C3orf56-201ENST00000624688 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms