RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-218	ENST00000624138	HIST1H2BA	Q96A08	127 aa		4.27	□□□□□ -1.73
LINC00963-218	ENST00000624138	SMIM3	Q9BZL3	60 aa		4.27	□□□□□ -1.73
LINC00963-218	ENST00000624138	NUDT15	Q9NV35	164 aa		4.27	□□□□□ -1.73
LINC00963-218	ENST00000624138	LYRM1	O43325	122 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	NOL3	O60936	208 aa	Known RBP	4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	SIX6	O95475	246 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	H2AFB2	P0C5Z0	115 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	SMIM17	P0DL12	118 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	IL7	P13232	177 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	EIF5A	P63241	154 aa	Known RBP	4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	SRSF3	P84103	164 aa	Known RBP	4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	SPANXN1	Q5VSR9	72 aa		4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138	RPP21	Q9H633	154 aa	Known RBP	4.26	□□□□□ -1.73
LINC00963-218	ENST00000624138		A0A087WZ39	114 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	MUC21	A0A140T8X8	626 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	KRTAP9-7	A8MTY7	169 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	LTA	P01374	205 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	BCL2	P10415	239 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	CAMP	P49913	170 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	NKX2-5	P52952	324 aa	Predicted RBP	4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	SUMO4	Q6EEV6	95 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	NUP35	Q8NFH5	326 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	TSKU	Q8WUA8	353 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	ISOC2	Q96AB3	205 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	FMC1	Q96HJ9	113 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	AP1S3	Q96PC3	154 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	MLST8	Q9BVC4	326 aa		4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	NKX6-2	Q9C056	277 aa	Predicted RBP	4.25	□□□□□ -1.73
LINC00963-218	ENST00000624138	IGLV4-69	A0A075B6H9	119 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	FAM74A7	A6NL05	159 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138		H7C423	109 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	APOM	O95445	188 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	MPC2	O95563	127 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	MEF2B	Q02080	365 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	COTL1	Q14019	142 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	RASL11A	Q6T310	242 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	OR5A1	Q8NGJ0	315 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	PPP1R1C	Q8WVI7	109 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	PSMG3	Q9BT73	122 aa	Predicted RBP	4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	MRPL18	Q9H0U6	180 aa	Known RBP	4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	NIT2	Q9NQR4	276 aa		4.24	□□□□□ -1.73
LINC00963-218	ENST00000624138	LINC00959	A0A1B0GUT2	108 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	CCL25	O15444	150 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	MB	P02144	154 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	ATP6V0C	P27449	155 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	XCL1	P47992	114 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	SST	P61278	116 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	UBE2G1	P62253	170 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	SERF2	P84101	59 aa		4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.23	□□□□□ -1.73
LINC00963-218	ENST00000624138	MGP	P08493	103 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	H2BFS	P57053	126 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	DEFA3	P59666	94 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	UBE2G2	P60604	165 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	RNF151	Q2KHN1	245 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	AMMECR1L	Q6DCA0	310 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	CD164L2	Q6UWJ8	174 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	C2orf48	Q96LS8	159 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138	TNFSF18	Q9UNG2	199 aa		4.22	□□□□□ -1.73
LINC00963-218	ENST00000624138		A0A087X002	238 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	NCR2	O95944	276 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	PET100	P0DJ07	73 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	CRYGA	P11844	174 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	ZNF25	P17030	456 aa	Predicted RBP	4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	NTF3	P20783	257 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	RPL18A	Q02543	176 aa	Known RBP	4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	ZNF726P1	Q15940	193 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	RNASEK	Q6P5S7	137 aa	Known RBP	4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	CAMK2N2	Q96S95	79 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	RETNLB	Q9BQ08	111 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	KRTAP4-1	Q9BYQ7	146 aa		4.21	□□□□□ -1.74
LINC00963-218	ENST00000624138	IGLV7-46	A0A075B6I9	117 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	FAM240B	A0A1B0GVZ2	78 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	FAM168B	A1KXE4	195 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	CCDC160	A6NGH7	325 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	BCL2L11	O43521	198 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	ZNF861P	O60384	105 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	ESD	P10768	282 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	SS18	Q15532	418 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138		Q6ZNX1	250 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	KRTAP7-1	Q8IUC3	87 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	TYMSOS	Q8TAI1	123 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	OPRPN	Q99935	248 aa	Predicted RBP	4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	TCEAL7	Q9BRU2	100 aa		4.2	□□□□□ -1.74
LINC00963-218	ENST00000624138	CTXND1	A0A1B0GTU2	59 aa		4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138	C19orf71	A6NCJ1	209 aa		4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138	IGLC6	P0CF74	106 aa		4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138	FHIT	P49789	147 aa		4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138	ASB16-AS1	Q495Z4	193 aa		4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138	EIF5AL1	Q6IS14	154 aa	Known RBP	4.19	□□□□□ -1.74
LINC00963-218	ENST00000624138		G3V3Q6	166 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	APCS	P02743	223 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	S100A9	P06702	114 aa	Known RBP	4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	TLX1NB	P0CAT3	122 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	AKR1C3	P42330	323 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	CTAG1A	P78358	180 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms