RNA–Protein interactions for RNA: ENST00000622838.4

SEM1-222, Transcript of SEM1, 26S proteasome complex subunit, human

TSL 5

Gene SEM1, Length 885 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEM1-222	ENST00000622838	HMGN2	P05204	90 aa	Known RBP	2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	ELOF1	P60002	83 aa	Known RBP	2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	C20orf197	Q8N268	126 aa		2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	DOCK2	Q92608	1830 aa		2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	PPRC1	Q5VV67	1664 aa	Known RBP	2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	NEXMIF	Q5QGS0	1516 aa		2.62	□□□□□ -1.99
SEM1-222	ENST00000622838	EXPH5	Q8NEV8	1989 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	MADD	Q8WXG6	1647 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	COL4A5	P29400	1685 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	TRBV6-4	A0A1B0GX49	114 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	ZNF815P	A8K554	130 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	HIGD1C	A8MV81	97 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	IQCF6	A8MYZ5	107 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	IGLV3-1	P01715	115 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	PDE6G	P18545	87 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	SSBP1	Q04837	148 aa	Known RBP	2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	DEFB121	Q5J5C9	76 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	PSENEN	Q9NZ42	101 aa		2.61	□□□□□ -1.99
SEM1-222	ENST00000622838	MED12L	Q86YW9	2145 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	CLTC	Q00610	1675 aa	Known RBP	2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	NWD2	Q9ULI1	1742 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	SCN11A	Q9UI33	1791 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	LOC285095	A0A1B0GVY8	99 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	FAM223B	A6NKX1	122 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	PPY	P01298	95 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	XAF1	Q6GPH4	301 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	LENEP	Q9Y5L5	61 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838		V9GYH0	126 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	OBSCN	Q5VST9	7968 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	SETBP1	Q9Y6X0	1596 aa		2.6	□□□□□ -1.99
SEM1-222	ENST00000622838	KNDC1	Q76NI1	1749 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	MYO5C	Q9NQX4	1742 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	LMTK2	Q8IWU2	1503 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	ABCC2	Q92887	1545 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838		A0A087WXM4	84 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	PPP1R17	O96001	155 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	KRTAP1-4	P0C5Y4	121 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	MT3	P25713	68 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	SPAG11B	Q08648	103 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	SPAG11A	Q6PDA7	123 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	TVP23C	Q96ET8	276 aa		2.59	□□□□□ -1.99
SEM1-222	ENST00000622838	IQSEC2	Q5JU85	1478 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	CUX1	P39880	1505 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	MYO3A	Q8NEV4	1616 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	MYMX	A0A1B0GTQ4	84 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	JMJD7-PLA2G4B	H0Y9G9	81 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	PSMG4	Q5JS54	123 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	STRCP1	A6NGW2	1772 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	KIAA0100	Q14667	2235 aa	Known RBP	2.58	□□□□□ -2
SEM1-222	ENST00000622838	EFCAB5	A4FU69	1503 aa		2.58	□□□□□ -2
SEM1-222	ENST00000622838	ESPL1	Q14674	2120 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	COL16A1	Q07092	1604 aa	Predicted RBP	2.57	□□□□□ -2
SEM1-222	ENST00000622838		A0A1W2PNN7	141 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	IGLV6-57	P01721	117 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	RNASE3	P12724	160 aa	Known RBP	2.57	□□□□□ -2
SEM1-222	ENST00000622838	KRTAP13-2	Q52LG2	175 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	WFDC10A	Q9H1F0	79 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	ARL2-SNX15	V9GYD0	113 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	DLG5	Q8TDM6	1919 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	HMGXB3	Q12766	1538 aa		2.57	□□□□□ -2
SEM1-222	ENST00000622838	DOCK11	Q5JSL3	2073 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGKV2-28	A0A075B6P5	120 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGLV3-32	A0A0A0MS00	114 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGKV3D-7	A0A0C4DH55	119 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGKV3OR2-268	A0A0C4DH90	116 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGKV1-17	P01599	117 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	IGKV2D-28	P01615	120 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	SFTA3	P0C7M3	94 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	SAA2	P0DJI9	122 aa	Predicted RBP	2.56	□□□□□ -2
SEM1-222	ENST00000622838	CCL3L1	P16619	93 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	C10orf55	Q5SWW7	151 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	KRTAP5-2	Q701N4	177 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838		Q86TA4	180 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	COX7B2	Q8TF08	81 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	UBR1	Q8IWV7	1749 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	CR1	P17927	2039 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838	UNC13C	Q8NB66	2214 aa		2.56	□□□□□ -2
SEM1-222	ENST00000622838		A0A1B0GWA3	101 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	CEBPZOS	A8MTT3	80 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838		H3BRN7	92 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	TOP2B	Q02880	1626 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	LRRC9	Q6ZRR7	1453 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	KRTAP4-3	Q9BYR4	195 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	KLK9	Q9UKQ9	250 aa		2.55	□□□□□ -2
SEM1-222	ENST00000622838	CEP192	Q8TEP8	1941 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	RGPD2	P0DJD1	1756 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	KRTAP9-6	A8MVA2	160 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	ARMS2	P0C7Q2	107 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	LINC00315	P59091	139 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	PLGLA	Q15195	96 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	C6orf201	Q7Z4U5	140 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	DEFB132	Q7Z7B7	95 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	PROK2	Q9HC23	129 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	KDM3B	Q7LBC6	1761 aa		2.54	□□□□□ -2
SEM1-222	ENST00000622838	KIF21A	Q7Z4S6	1674 aa		2.53	□□□□□ -2
SEM1-222	ENST00000622838	MED12	Q93074	2177 aa		2.53	□□□□□ -2
SEM1-222	ENST00000622838	FXYD1	O00168	92 aa		2.53	□□□□□ -2
SEM1-222	ENST00000622838	DNAL4	O96015	105 aa		2.53	□□□□□ -2
SEM1-222	ENST00000622838	IGLV3-19	P01714	112 aa		2.53	□□□□□ -2
SEM1-222	ENST00000622838	COX8A	P10176	69 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms