RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 TRGC1P0CF51 173 aa15.04■□□□□ -0
CPSF1-214ENST00000622776 SULT1A2P50226 295 aa15.04■□□□□ -0
CPSF1-214ENST00000622776 RGS21Q2M5E4 152 aa15.04■□□□□ -0
CPSF1-214ENST00000622776 DPH3P1Q9H4G8 78 aa15.04■□□□□ -0
CPSF1-214ENST00000622776 TNXBP22105 4242 aa15.03■□□□□ -0
CPSF1-214ENST00000622776 XKRY2A2RUG3 117 aa15.03■□□□□ -0
CPSF1-214ENST00000622776 AMTP48728 403 aa15.03■□□□□ -0
CPSF1-214ENST00000622776 COTL1Q14019 142 aa15.03■□□□□ -0
CPSF1-214ENST00000622776 C15orf56Q8N910 161 aa15.03■□□□□ -0
CPSF1-214ENST00000622776 RAB19A4D1S5 217 aa15.02■□□□□ -0
CPSF1-214ENST00000622776 GAGE12HA6NDE8 117 aa15.02■□□□□ -0
CPSF1-214ENST00000622776 PHOX2AO14813 284 aa15.02■□□□□ -0
CPSF1-214ENST00000622776 EIF5AP63241 154 aaKnown RBP15.02■□□□□ -0
CPSF1-214ENST00000622776 CFAP161Q6P656 301 aa15.02■□□□□ -0
CPSF1-214ENST00000622776 LYZL1Q6UWQ5 148 aa15.02■□□□□ -0
CPSF1-214ENST00000622776 NTF3P20783 257 aa15.01□□□□□ -0.01
CPSF1-214ENST00000622776 C7orf33Q8WU49 177 aa15.01□□□□□ -0.01
CPSF1-214ENST00000622776 SMIM12Q96EX1 92 aa15.01□□□□□ -0.01
CPSF1-214ENST00000622776 LRP2P98164 4655 aa15□□□□□ -0.01
CPSF1-214ENST00000622776 TRAV1-1A0A0B4J248 108 aa15□□□□□ -0.01
CPSF1-214ENST00000622776 IFNA1P01562 189 aa15□□□□□ -0.01
CPSF1-214ENST00000622776 GNG4P50150 75 aa15□□□□□ -0.01
CPSF1-214ENST00000622776 COX6A2Q02221 97 aa15□□□□□ -0.01
CPSF1-214ENST00000622776 RPS10P46783 165 aaKnown RBP14.99□□□□□ -0.01
CPSF1-214ENST00000622776 IGKV3OR2-268A0A0C4DH90 116 aa14.98□□□□□ -0.01
CPSF1-214ENST00000622776 HIGD2BQ4VC39 106 aa14.97□□□□□ -0.01
CPSF1-214ENST00000622776 C9orf62Q8N4C0 152 aa14.97□□□□□ -0.01
CPSF1-214ENST00000622776 PRSS3P2Q8NHM4 247 aa14.97□□□□□ -0.01
CPSF1-214ENST00000622776 NDUFS6O75380 124 aaKnown RBP14.96□□□□□ -0.01
CPSF1-214ENST00000622776 MAJINQ3KP22 176 aa14.96□□□□□ -0.01
CPSF1-214ENST00000622776 TRBV20OR9-2A0A075B6H5 130 aa14.95□□□□□ -0.02
CPSF1-214ENST00000622776 CTRLP40313 264 aa14.95□□□□□ -0.02
CPSF1-214ENST00000622776 GATD1Q8NB37 220 aa14.95□□□□□ -0.02
CPSF1-214ENST00000622776 GTSF1Q8WW33 167 aa14.95□□□□□ -0.02
CPSF1-214ENST00000622776 BIN3Q9NQY0 253 aa14.95□□□□□ -0.02
CPSF1-214ENST00000622776 IGKV2-24A0A0C4DH68 120 aa14.94□□□□□ -0.02
CPSF1-214ENST00000622776 MEF2BQ02080 365 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-214ENST00000622776 CHCHD10Q8WYQ3 142 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-214ENST00000622776 MED9Q9NWA0 146 aa14.94□□□□□ -0.02
CPSF1-214ENST00000622776 TEX46H3BTG2 121 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 PDE6DO43924 150 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 TWIST1Q15672 202 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 AMMECR1LQ6DCA0 310 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 NUDT10Q8NFP7 164 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 NUDT11Q96G61 164 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 CNFNQ9BYD5 112 aa14.93□□□□□ -0.02
CPSF1-214ENST00000622776 TRAV26-2A0A0B4J265 109 aa14.92□□□□□ -0.02
CPSF1-214ENST00000622776 PRR3P79522 188 aaKnown RBP14.92□□□□□ -0.02
CPSF1-214ENST00000622776 Q6ZNX1 250 aa14.92□□□□□ -0.02
CPSF1-214ENST00000622776 STPG4Q8N801 248 aa14.92□□□□□ -0.02
CPSF1-214ENST00000622776 LINC01600Q96MT4 127 aa14.92□□□□□ -0.02
CPSF1-214ENST00000622776 GVQW2A0A096LPI5 108 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-214ENST00000622776 RNASEKQ6P5S7 137 aaKnown RBP14.91□□□□□ -0.02
CPSF1-214ENST00000622776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-214ENST00000622776 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
CPSF1-214ENST00000622776 NCR2O95944 276 aa14.9□□□□□ -0.02
CPSF1-214ENST00000622776 LYPD6BQ8NI32 183 aa14.9□□□□□ -0.02
CPSF1-214ENST00000622776 RPL39LQ96EH5 51 aaKnown RBP14.89□□□□□ -0.03
CPSF1-214ENST00000622776 A0A096LNI7 61 aa14.88□□□□□ -0.03
CPSF1-214ENST00000622776 H7C423 109 aa14.88□□□□□ -0.03
CPSF1-214ENST00000622776 FGF6P10767 208 aa14.88□□□□□ -0.03
CPSF1-214ENST00000622776 EIF5AL1Q6IS14 154 aaKnown RBP14.88□□□□□ -0.03
CPSF1-214ENST00000622776 APCSP02743 223 aa14.87□□□□□ -0.03
CPSF1-214ENST00000622776 BCL2P10415 239 aa14.87□□□□□ -0.03
CPSF1-214ENST00000622776 FOXI1Q12951 378 aa14.87□□□□□ -0.03
CPSF1-214ENST00000622776 RPP21Q9H633 154 aaKnown RBP14.87□□□□□ -0.03
CPSF1-214ENST00000622776 RNASE7Q9H1E1 156 aaKnown RBP14.86□□□□□ -0.03
CPSF1-214ENST00000622776 ODF1Q14990 250 aa14.85□□□□□ -0.03
CPSF1-214ENST00000622776 SDHAF1A6NFY7 115 aa14.84□□□□□ -0.03
CPSF1-214ENST00000622776 FOXA3P55318 350 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-214ENST00000622776 SMIM15Q7Z3B0 74 aa14.84□□□□□ -0.03
CPSF1-214ENST00000622776 OR5A1Q8NGJ0 315 aa14.84□□□□□ -0.03
CPSF1-214ENST00000622776 A0A0J9YXV3 536 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 K7EN84 100 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 ZNF25P17030 456 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-214ENST00000622776 XCL1P47992 114 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 TEX261Q6UWH6 196 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 OCC1Q8TAD7 63 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 LINC00474Q9P2X8 69 aa14.83□□□□□ -0.04
CPSF1-214ENST00000622776 RNF213Q63HN8 5207 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 FAM231BA6NCW3 169 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 SPINK6Q6UWN8 80 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 LINC00526Q96FQ7 95 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 BTF3L4Q96K17 158 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 PKIGQ9Y2B9 76 aa14.81□□□□□ -0.04
CPSF1-214ENST00000622776 IGHV1-58A0A0C4DH39 117 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 LINC00959A0A1B0GUT2 108 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 CCL25O15444 150 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 PMCHP20382 165 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 KRTAP10-8P60410 259 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 TMEM101Q96IK0 257 aa14.8□□□□□ -0.04
CPSF1-214ENST00000622776 I3L3M4 83 aa14.79□□□□□ -0.04
CPSF1-214ENST00000622776 TAGLN2P37802 199 aaKnown RBP14.79□□□□□ -0.04
CPSF1-214ENST00000622776 REG3GQ6UW15 175 aa14.79□□□□□ -0.04
CPSF1-214ENST00000622776 CARD19Q96LW7 228 aa14.79□□□□□ -0.04
CPSF1-214ENST00000622776 TRBV6-5A0A0K0K1A5 114 aa14.77□□□□□ -0.05
CPSF1-214ENST00000622776 ESDP10768 282 aa14.77□□□□□ -0.05
CPSF1-214ENST00000622776 SRSF9Q13242 221 aaKnown RBP eCLIP14.76□□□□□ -0.05
CPSF1-214ENST00000622776 GATCO43716 136 aaKnown RBP14.75□□□□□ -0.05
CPSF1-214ENST00000622776 TSHBP01222 138 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms