RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 Q8N8P6 123 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 IQCJQ1A5X6 159 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 C18orf32Q8TCD1 76 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 UPK3BQ9BT76 320 aa13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 NXT2Q9NPJ8 142 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-221ENST00000622702 TCAPO15273 167 aa13.6□□□□□ -0.23
PDLIM2-221ENST00000622702 UBE2DNLQ8IWF7 75 aa13.6□□□□□ -0.23
PDLIM2-221ENST00000622702 TRBV25-1A0A075B6N4 114 aa13.59□□□□□ -0.23
PDLIM2-221ENST00000622702 IGHV1-24A0A0C4DH33 117 aa13.59□□□□□ -0.23
PDLIM2-221ENST00000622702 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
PDLIM2-221ENST00000622702 DNAH6Q9C0G6 4158 aa13.58□□□□□ -0.24
PDLIM2-221ENST00000622702 K7EMI3 77 aa13.58□□□□□ -0.24
PDLIM2-221ENST00000622702 FCER1GP30273 86 aa13.58□□□□□ -0.24
PDLIM2-221ENST00000622702 IFI27P40305 119 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-221ENST00000622702 AMTP48728 403 aa13.58□□□□□ -0.24
PDLIM2-221ENST00000622702 TRAV8-6A0A0B4J262 113 aa13.57□□□□□ -0.24
PDLIM2-221ENST00000622702 PRSS3P2Q8NHM4 247 aa13.57□□□□□ -0.24
PDLIM2-221ENST00000622702 ESDP10768 282 aa13.56□□□□□ -0.24
PDLIM2-221ENST00000622702 TMEM243Q9BU79 118 aa13.56□□□□□ -0.24
PDLIM2-221ENST00000622702 LINC01546A6NGU7 62 aa13.55□□□□□ -0.24
PDLIM2-221ENST00000622702 CHCHD7Q9BUK0 85 aa13.55□□□□□ -0.24
PDLIM2-221ENST00000622702 Q0VG73 95 aa13.55□□□□□ -0.24
PDLIM2-221ENST00000622702 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
PDLIM2-221ENST00000622702 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BKO60814 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 RAB5BP61020 215 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BCP62807 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 LAGE3Q14657 143 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST2H2BEQ16778 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 ORMDL2Q53FV1 153 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 FA2HQ7L5A8 372 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 NIT1Q86X76 327 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BHQ93079 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 URB1-AS1Q96HZ7 61 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BNQ99877 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 HIST1H2BMQ99879 126 aa13.53□□□□□ -0.24
PDLIM2-221ENST00000622702 C1orf196B1AJZ1 125 aa13.52□□□□□ -0.25
PDLIM2-221ENST00000622702 H7C423 109 aa13.52□□□□□ -0.25
PDLIM2-221ENST00000622702 SIVA1O15304 175 aa13.52□□□□□ -0.25
PDLIM2-221ENST00000622702 LINC00614P0C842 121 aa13.52□□□□□ -0.25
PDLIM2-221ENST00000622702 PKIAP61925 76 aa13.52□□□□□ -0.25
PDLIM2-221ENST00000622702 DNAH10OSP0CZ25 163 aa13.51□□□□□ -0.25
PDLIM2-221ENST00000622702 C20orf203Q8NBC4 194 aa13.51□□□□□ -0.25
PDLIM2-221ENST00000622702 Q9H8V8 135 aa13.51□□□□□ -0.25
PDLIM2-221ENST00000622702 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
PDLIM2-221ENST00000622702 LINC01556Q5JQF7 62 aa13.5□□□□□ -0.25
PDLIM2-221ENST00000622702 BAGE3Q86Y29 109 aa13.5□□□□□ -0.25
PDLIM2-221ENST00000622702 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-221ENST00000622702 IGKV2-29A2NJV5 120 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-221ENST00000622702 UBE2L6O14933 153 aa13.49□□□□□ -0.25
PDLIM2-221ENST00000622702 GAGE6Q13070 117 aa13.49□□□□□ -0.25
PDLIM2-221ENST00000622702 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 TMEM18Q96B42 140 aa13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 CHCHD1Q96BP2 118 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 DNAH2Q9P225 4427 aa13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 G0S2P27469 103 aa13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 RNASEKQ6P5S7 137 aaKnown RBP13.48□□□□□ -0.25
PDLIM2-221ENST00000622702 DNAH10Q8IVF4 4471 aa13.47□□□□□ -0.25
PDLIM2-221ENST00000622702 A0A087WX48 190 aa13.47□□□□□ -0.25
PDLIM2-221ENST00000622702 A0A1B0GUV1 79 aa13.47□□□□□ -0.25
PDLIM2-221ENST00000622702 MPV17L2Q567V2 206 aa13.47□□□□□ -0.25
PDLIM2-221ENST00000622702 MRPL52Q86TS9 123 aaKnown RBP13.47□□□□□ -0.25
PDLIM2-221ENST00000622702 M0R2N4 97 aa13.46□□□□□ -0.25
PDLIM2-221ENST00000622702 FGF6P10767 208 aa13.46□□□□□ -0.25
PDLIM2-221ENST00000622702 RBX1P62877 108 aa13.46□□□□□ -0.25
PDLIM2-221ENST00000622702 Q8N3U1 123 aa13.46□□□□□ -0.25
PDLIM2-221ENST00000622702 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
PDLIM2-221ENST00000622702 K7EP13 123 aa13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 ZNF25P17030 456 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 LINC00310P59036 64 aa13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 RPL39P62891 51 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 C2orf66Q6UXQ4 117 aa13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 TIMM21Q9BVV7 248 aa13.45□□□□□ -0.26
PDLIM2-221ENST00000622702 SERF1AO75920 110 aa13.44□□□□□ -0.26
PDLIM2-221ENST00000622702 AMMECR1LQ6DCA0 310 aa13.44□□□□□ -0.26
PDLIM2-221ENST00000622702 Q8N976 141 aa13.44□□□□□ -0.26
PDLIM2-221ENST00000622702 UBE2D4Q9Y2X8 147 aa13.44□□□□□ -0.26
PDLIM2-221ENST00000622702 CSDC2Q9Y534 153 aaKnown RBP13.44□□□□□ -0.26
PDLIM2-221ENST00000622702 LINC01549A6NIU2 74 aa13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 IGHV3-33P01772 117 aa13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 BTF3P20290 206 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 COA6Q5JTJ3 125 aaKnown RBP13.43□□□□□ -0.26
PDLIM2-221ENST00000622702 A0A096LNJ9 63 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 TOMM6Q96B49 74 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 SPANXA1Q9NS26 97 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 TRAV9-2A0A087WT02 112 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 HSBP1O75506 76 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 TTC32Q5I0X7 151 aa13.42□□□□□ -0.26
PDLIM2-221ENST00000622702 C10orf126Q8N4M7 172 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms