RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 UBE2V1Q13404 147 aa10.09□□□□□ -0.79
EPB42-210ENST00000622454 VAMP3Q15836 100 aa10.09□□□□□ -0.79
EPB42-210ENST00000622454 OPRPNQ99935 248 aaPredicted RBP10.09□□□□□ -0.79
EPB42-210ENST00000622454 C1QTNF4Q9BXJ3 329 aa10.09□□□□□ -0.79
EPB42-210ENST00000622454 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 GCSHP23434 173 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 HERVK_113P61574 105 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 PYGO1Q9Y3Y4 419 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 NOTCH3Q9UM47 2321 aa10.08□□□□□ -0.8
EPB42-210ENST00000622454 H3BRM9 83 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 OR4C5Q8NGB2 326 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 RPL35AP18077 110 aaKnown RBP10.07□□□□□ -0.8
EPB42-210ENST00000622454 TAL2Q16559 108 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 VCX2Q9H322 139 aa10.07□□□□□ -0.8
EPB42-210ENST00000622454 IGLV4-3A0A075B6K6 122 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 CCL25O15444 150 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 TM2D2Q9BX73 214 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 Q6ZTI0 123 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 CEND1Q8N111 149 aa10.06□□□□□ -0.8
EPB42-210ENST00000622454 FXYD2P54710 66 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
EPB42-210ENST00000622454 COTL1Q14019 142 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 CRYBA4P53673 196 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 CSNK1G2-AS1Q8NCQ2 148 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 CHCHD7Q9BUK0 85 aa10.05□□□□□ -0.8
EPB42-210ENST00000622454 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
EPB42-210ENST00000622454 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
EPB42-210ENST00000622454 HIST1H4GQ99525 98 aa10.04□□□□□ -0.8
EPB42-210ENST00000622454 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
EPB42-210ENST00000622454 F8P00451 2351 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 K7EP13 123 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 AMMECR1LQ6DCA0 310 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 TENM1Q9UKZ4 2725 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 PHLDA1Q8WV24 401 aaPredicted RBP10.03□□□□□ -0.8
EPB42-210ENST00000622454 AMELXQ99217 191 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
EPB42-210ENST00000622454 TRBV7-3A0A075B6L6 115 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 IGHV3-38A0A0C4DH36 116 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.02□□□□□ -0.81
EPB42-210ENST00000622454 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 RAB37Q96AX2 223 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 CEMP1Q6PRD7 247 aaPredicted RBP10.02□□□□□ -0.81
EPB42-210ENST00000622454 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 UBE2D4Q9Y2X8 147 aa10.02□□□□□ -0.81
EPB42-210ENST00000622454 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
EPB42-210ENST00000622454 K7EQD1 137 aa10.01□□□□□ -0.81
EPB42-210ENST00000622454 INSL3P51460 131 aa10.01□□□□□ -0.81
EPB42-210ENST00000622454 H3BUT2 72 aa10.01□□□□□ -0.81
EPB42-210ENST00000622454 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
EPB42-210ENST00000622454 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
EPB42-210ENST00000622454 VWFP04275 2813 aa10□□□□□ -0.81
EPB42-210ENST00000622454 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
EPB42-210ENST00000622454 TMEM223A0PJW6 202 aa10□□□□□ -0.81
EPB42-210ENST00000622454 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
EPB42-210ENST00000622454 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
EPB42-210ENST00000622454 OVOL2Q9BRP0 275 aa10□□□□□ -0.81
EPB42-210ENST00000622454 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
EPB42-210ENST00000622454 J3QQQ9 107 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
EPB42-210ENST00000622454 PLEKHB2Q96CS7 222 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 BAHCC1Q9P281 2608 aa9.99□□□□□ -0.81
EPB42-210ENST00000622454 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 LEPROTO15243 131 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 CIDEAO60543 219 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 GAGE7O76087 117 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 GAGE12FP0CL80 117 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 GAGE12GP0CL81 117 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 GAGE12IP0CL82 117 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 LGALS3P17931 250 aaKnown RBP9.98□□□□□ -0.81
EPB42-210ENST00000622454 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 DAZ4Q86SG3 579 aaKnown RBP9.98□□□□□ -0.81
EPB42-210ENST00000622454 DAZ3Q9NR90 486 aaKnown RBP9.98□□□□□ -0.81
EPB42-210ENST00000622454 RNASE13Q5GAN3 156 aaKnown RBP9.98□□□□□ -0.81
EPB42-210ENST00000622454 SVIPQ8NHG7 77 aa9.98□□□□□ -0.81
EPB42-210ENST00000622454 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
EPB42-210ENST00000622454 ATRQ13535 2644 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 K7ERJ3 54 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
EPB42-210ENST00000622454 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
EPB42-210ENST00000622454 A0A0J9YY99 117 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 A0A1W2PPM0 123 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 UBE2D3P61077 147 aa9.97□□□□□ -0.81
EPB42-210ENST00000622454 UBE2D2P62837 147 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms