RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.94□□□□□ -1.46
TARDBP-227ENST00000622057 IGKV3OR2-268A0A0C4DH90 116 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 XKRY2A2RUG3 117 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 C19orf71A6NCJ1 209 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 F2Z2F3 143 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 TRGC1P0CF51 173 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 NTF3P20783 257 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 GNG4P50150 75 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 SULT1A2P50226 295 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 CNBPP62633 177 aaKnown RBP5.94□□□□□ -1.46
TARDBP-227ENST00000622057 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 Q6ZRU5 148 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 C11orf52Q96A22 123 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 DPH3P1Q9H4G8 78 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 MED9Q9NWA0 146 aa5.94□□□□□ -1.46
TARDBP-227ENST00000622057 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
TARDBP-227ENST00000622057 IFNA1P01562 189 aa5.93□□□□□ -1.46
TARDBP-227ENST00000622057 AMTP48728 403 aa5.93□□□□□ -1.46
TARDBP-227ENST00000622057 COTL1Q14019 142 aa5.93□□□□□ -1.46
TARDBP-227ENST00000622057 TWIST1Q15672 202 aa5.93□□□□□ -1.46
TARDBP-227ENST00000622057 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
TARDBP-227ENST00000622057 CIRBPQ14011 172 aaKnown RBP5.92□□□□□ -1.46
TARDBP-227ENST00000622057 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
TARDBP-227ENST00000622057 NUDT10Q8NFP7 164 aa5.92□□□□□ -1.46
TARDBP-227ENST00000622057 NUDT11Q96G61 164 aa5.92□□□□□ -1.46
TARDBP-227ENST00000622057 PGLYRP4Q96LB8 373 aa5.92□□□□□ -1.46
TARDBP-227ENST00000622057 TRAV1-1A0A0B4J248 108 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 PDE6DO43924 150 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 MT1HL1P0DM35 61 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 COX6A2Q02221 97 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 HIGD2BQ4VC39 106 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 C9orf62Q8N4C0 152 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 SPACA4Q8TDM5 124 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 GTSF1Q8WW33 167 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 SMIM12Q96EX1 92 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 RNF185Q96GF1 192 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 BIN3Q9NQY0 253 aa5.91□□□□□ -1.46
TARDBP-227ENST00000622057 TRAV26-2A0A0B4J265 109 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 PHOX2AO14813 284 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 RPS10P46783 165 aaKnown RBP5.9□□□□□ -1.46
TARDBP-227ENST00000622057 MEF2BQ02080 365 aaPredicted RBP5.9□□□□□ -1.46
TARDBP-227ENST00000622057 MAJINQ3KP22 176 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 AMMECR1LQ6DCA0 310 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 EIF5AL1Q6IS14 154 aaKnown RBP5.9□□□□□ -1.46
TARDBP-227ENST00000622057 RNASEKQ6P5S7 137 aaKnown RBP5.9□□□□□ -1.46
TARDBP-227ENST00000622057 C15orf56Q8N910 161 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 GATD1Q8NB37 220 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 PRSS3P2Q8NHM4 247 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 C7orf33Q8WU49 177 aa5.9□□□□□ -1.46
TARDBP-227ENST00000622057 TRBV20OR9-2A0A075B6H5 130 aa5.89□□□□□ -1.47
TARDBP-227ENST00000622057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-227ENST00000622057 IGKV2-24A0A0C4DH68 120 aa5.89□□□□□ -1.47
TARDBP-227ENST00000622057 IGKV2-29A2NJV5 120 aaPredicted RBP5.89□□□□□ -1.47
TARDBP-227ENST00000622057 NDUFS6O75380 124 aaKnown RBP5.89□□□□□ -1.47
TARDBP-227ENST00000622057 Q6ZNX1 250 aa5.89□□□□□ -1.47
TARDBP-227ENST00000622057 LYPD6BQ8NI32 183 aa5.89□□□□□ -1.47
TARDBP-227ENST00000622057 RNASE7Q9H1E1 156 aaKnown RBP5.89□□□□□ -1.47
TARDBP-227ENST00000622057 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
TARDBP-227ENST00000622057 APCSP02743 223 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 BCL2P10415 239 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 CTRLP40313 264 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
TARDBP-227ENST00000622057 SMIM15Q7Z3B0 74 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 STPG4Q8N801 248 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 OCC1Q8TAD7 63 aa5.88□□□□□ -1.47
TARDBP-227ENST00000622057 CHCHD10Q8WYQ3 142 aaPredicted RBP5.88□□□□□ -1.47
TARDBP-227ENST00000622057 RPL39LQ96EH5 51 aaKnown RBP5.88□□□□□ -1.47
TARDBP-227ENST00000622057 RPP21Q9H633 154 aaKnown RBP5.88□□□□□ -1.47
TARDBP-227ENST00000622057 PMCHP20382 165 aa5.87□□□□□ -1.47
TARDBP-227ENST00000622057 SDHAF1A6NFY7 115 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 H7C423 109 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 K7EN84 100 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 NCR2O95944 276 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 FGF6P10767 208 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
TARDBP-227ENST00000622057 TMEM101Q96IK0 257 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 BTF3L4Q96K17 158 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 CNFNQ9BYD5 112 aa5.86□□□□□ -1.47
TARDBP-227ENST00000622057 I3L3M4 83 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 GATCO43716 136 aaKnown RBP5.85□□□□□ -1.47
TARDBP-227ENST00000622057 XCL1P47992 114 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 FOXI1Q12951 378 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 TEX261Q6UWH6 196 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 OR5A1Q8NGJ0 315 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 LINC00526Q96FQ7 95 aa5.85□□□□□ -1.47
TARDBP-227ENST00000622057 A0A096LNI7 61 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.47
TARDBP-227ENST00000622057 LINC00959A0A1B0GUT2 108 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 CCL25O15444 150 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 TAGLN2P37802 199 aaKnown RBP5.84□□□□□ -1.47
TARDBP-227ENST00000622057 SLC51BQ86UW2 128 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 LINC01600Q96MT4 127 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 TNXBP22105 4242 aa5.84□□□□□ -1.47
TARDBP-227ENST00000622057 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
TARDBP-227ENST00000622057 FAM231BA6NCW3 169 aa5.83□□□□□ -1.48
TARDBP-227ENST00000622057 GAS8-AS1O95177 125 aa5.83□□□□□ -1.48
TARDBP-227ENST00000622057 ZNF25P17030 456 aaPredicted RBP5.83□□□□□ -1.48
TARDBP-227ENST00000622057 CEBPGP53567 150 aa5.83□□□□□ -1.48
TARDBP-227ENST00000622057 PRR3P79522 188 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms