RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 IQCJQ1A5X6 159 aa7.34□□□□□ -1.23
CPNE3-210ENST00000621245 FER1L6-AS1Q8NA97 138 aa7.34□□□□□ -1.23
CPNE3-210ENST00000621245 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
CPNE3-210ENST00000621245 TRBV25-1A0A075B6N4 114 aa7.33□□□□□ -1.24
CPNE3-210ENST00000621245 SLPIP03973 132 aa7.33□□□□□ -1.24
CPNE3-210ENST00000621245 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
CPNE3-210ENST00000621245 C14orf177Q52M58 125 aa7.33□□□□□ -1.24
CPNE3-210ENST00000621245 MANBALQ9NQG1 85 aa7.33□□□□□ -1.24
CPNE3-210ENST00000621245 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
CPNE3-210ENST00000621245 RAB5CP51148 216 aa7.32□□□□□ -1.24
CPNE3-210ENST00000621245 RPL37AP61513 92 aaKnown RBP7.32□□□□□ -1.24
CPNE3-210ENST00000621245 LYZL1Q6UWQ5 148 aa7.32□□□□□ -1.24
CPNE3-210ENST00000621245 C9orf163Q8N9P6 203 aa7.32□□□□□ -1.24
CPNE3-210ENST00000621245 TRAV1-1A0A0B4J248 108 aa7.31□□□□□ -1.24
CPNE3-210ENST00000621245 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
CPNE3-210ENST00000621245 REG3AQ06141 175 aa7.31□□□□□ -1.24
CPNE3-210ENST00000621245 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 K7EN84 100 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 GNG4P50150 75 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 MEF2BQ02080 365 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-210ENST00000621245 TMEM97Q5BJF2 176 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 RASL11AQ6T310 242 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 SDIM1Q6ZPB5 146 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
CPNE3-210ENST00000621245 P01737 135 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 NTF3P20783 257 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 CTRLP40313 264 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 SULT1A2P50226 295 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 FOXA3P55318 350 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-210ENST00000621245 RPS20P60866 119 aaKnown RBP7.29□□□□□ -1.24
CPNE3-210ENST00000621245 PKIAP61925 76 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 CACNG7P62955 275 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 C15orf56Q8N910 161 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
CPNE3-210ENST00000621245 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
CPNE3-210ENST00000621245 hDV102S1A0JD36 115 aa7.28□□□□□ -1.24
CPNE3-210ENST00000621245 OXTP01178 125 aa7.28□□□□□ -1.24
CPNE3-210ENST00000621245 BCL2P10415 239 aa7.28□□□□□ -1.24
CPNE3-210ENST00000621245 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
CPNE3-210ENST00000621245 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
CPNE3-210ENST00000621245 GATD1Q8NB37 220 aa7.28□□□□□ -1.24
CPNE3-210ENST00000621245 RPL39LQ96EH5 51 aaKnown RBP7.28□□□□□ -1.24
CPNE3-210ENST00000621245 MED9Q9NWA0 146 aa7.28□□□□□ -1.24
CPNE3-210ENST00000621245 IFNA1P01562 189 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 PCP4P48539 62 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 CNBPP62633 177 aaKnown RBP7.27□□□□□ -1.25
CPNE3-210ENST00000621245 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
CPNE3-210ENST00000621245 Q6ZNX1 250 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 GTSF1Q8WW33 167 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 PGLYRP4Q96LB8 373 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 DPH3P1Q9H4G8 78 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 NIT2Q9NQR4 276 aa7.27□□□□□ -1.25
CPNE3-210ENST00000621245 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 H7C1H1 209 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 PDE6DO43924 150 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 AMTP48728 403 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 SUMO2P61956 95 aaKnown RBP7.26□□□□□ -1.25
CPNE3-210ENST00000621245 SMIM12Q96EX1 92 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 CNFNQ9BYD5 112 aa7.26□□□□□ -1.25
CPNE3-210ENST00000621245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-210ENST00000621245 IGKV2-29A2NJV5 120 aaPredicted RBP7.25□□□□□ -1.25
CPNE3-210ENST00000621245 F2Z2F3 143 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 TRGC1P0CF51 173 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 TWIST1Q15672 202 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 C9orf62Q8N4C0 152 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 OCC1Q8TAD7 63 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 SPACA4Q8TDM5 124 aa7.25□□□□□ -1.25
CPNE3-210ENST00000621245 RPP21Q9H633 154 aaKnown RBP7.25□□□□□ -1.25
CPNE3-210ENST00000621245 A0A087WYN8 130 aa7.24□□□□□ -1.25
CPNE3-210ENST00000621245 COTL1Q14019 142 aa7.24□□□□□ -1.25
CPNE3-210ENST00000621245 HIGD2BQ4VC39 106 aa7.24□□□□□ -1.25
CPNE3-210ENST00000621245 TCTE3Q8IZS6 198 aa7.24□□□□□ -1.25
CPNE3-210ENST00000621245 LPAP08519 4548 aa7.24□□□□□ -1.25
CPNE3-210ENST00000621245 IGHV3-64A0A075B6Q5 118 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 TRAV8-4A0A0B4J246 113 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 XKRY2A2RUG3 117 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 UBE2L6O14933 153 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 SERTAD4-AS1Q5TG53 156 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 CTDSP1Q9GZU7 261 aa7.23□□□□□ -1.25
CPNE3-210ENST00000621245 TEX46H3BTG2 121 aa7.22□□□□□ -1.25
CPNE3-210ENST00000621245 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
CPNE3-210ENST00000621245 WDR73Q6P4I2 378 aa7.22□□□□□ -1.25
CPNE3-210ENST00000621245 SLC51BQ86UW2 128 aa7.22□□□□□ -1.25
CPNE3-210ENST00000621245 FAM231BA6NCW3 169 aa7.21□□□□□ -1.26
CPNE3-210ENST00000621245 PHOX2AO14813 284 aa7.21□□□□□ -1.26
CPNE3-210ENST00000621245 COX6A2Q02221 97 aa7.21□□□□□ -1.26
CPNE3-210ENST00000621245 EIF5AL1Q6IS14 154 aaKnown RBP7.21□□□□□ -1.26
CPNE3-210ENST00000621245 PRSS3P2Q8NHM4 247 aa7.21□□□□□ -1.26
CPNE3-210ENST00000621245 CHCHD10Q8WYQ3 142 aaPredicted RBP7.21□□□□□ -1.26
CPNE3-210ENST00000621245 LINC00526Q96FQ7 95 aa7.21□□□□□ -1.26
CPNE3-210ENST00000621245 FOXI1Q12951 378 aa7.2□□□□□ -1.26
CPNE3-210ENST00000621245 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
CPNE3-210ENST00000621245 IGKV2-24A0A0C4DH68 120 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 TSHBP01222 138 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 APCSP02743 223 aa7.19□□□□□ -1.26
CPNE3-210ENST00000621245 FGF6P10767 208 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms