RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CCL25O15444 150 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 FGF6P10767 208 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 LINC00315P59091 139 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 ESRGQ1W209 222 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 BVES-AS1Q5T3Y7 98 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 Q5VSD8 79 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 C2orf91Q6ZV80 131 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 OR8A1Q8NGG7 326 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 Q8TAT8 98 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 PRELID3AQ96N28 172 aa5.4□□□□□ -1.54
CLK1-215ENST00000621181 LRP1BQ9NZR2 4599 aa5.4□□□□□ -1.55
CLK1-215ENST00000621181 TMSB15BA0A087X1C1 80 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 GAGE12BA1L429 117 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 GAGE7O76087 117 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 GAGE12FP0CL80 117 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 GAGE12GP0CL81 117 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 GAGE12IP0CL82 117 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 COX8AP10176 69 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 FA2HQ7L5A8 372 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 ORMDL3Q8N138 153 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 FER1L6-AS1Q8NA97 138 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 NPYP01303 97 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 FUSP35637 526 aaKnown RBP eCLIP5.39□□□□□ -1.55
CLK1-215ENST00000621181 ERCC8Q13216 396 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 UBE2V1Q13404 147 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 MPV17L2Q567V2 206 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 PRSS3P2Q8NHM4 247 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 PMCHL2Q9BQD1 86 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 TPPP3Q9BW30 176 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 MSRB1Q9NZV6 116 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 C11orf21Q9P2W6 132 aa5.39□□□□□ -1.55
CLK1-215ENST00000621181 SRRM2Q9UQ35 2752 aaKnown RBP5.38□□□□□ -1.55
CLK1-215ENST00000621181 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 FABP5P3A8MUU1 101 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 H3BNG1 76 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 GAS8-AS1O95177 125 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 ANKRD39Q53RE8 183 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 MRPL53Q96EL3 112 aaKnown RBP5.38□□□□□ -1.55
CLK1-215ENST00000621181 AGPAT4-IT1Q9H0P7 198 aa5.38□□□□□ -1.55
CLK1-215ENST00000621181 MUC21A0A0G2JKD1 596 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 MUC21A0A140T8X8 626 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 HSBP1L1C9JCN9 74 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 SMKR1H3BMG3 65 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 XGP55808 180 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 MUC21Q5SSG8 566 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 Q6ZRN7 208 aaPredicted RBP5.37□□□□□ -1.55
CLK1-215ENST00000621181 LINC00612Q8N6U2 182 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 SLC50A1Q9BRV3 221 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 LOC389332A0A1B0GUA5 103 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 PRSS47A8MTI9 375 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 K7EP13 123 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 SIVA1O15304 175 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 HBDP02042 147 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 PPBPP02775 128 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 KIR3DS1Q14943 382 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 TWIST1Q15672 202 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 C9orf47Q6ZRZ4 202 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 BOD1L2Q8IYS8 172 aa5.37□□□□□ -1.55
CLK1-215ENST00000621181 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
CLK1-215ENST00000621181 TRGV2A0A075B6R0 118 aa5.36□□□□□ -1.55
CLK1-215ENST00000621181 A0A096LPF7 62 aa5.36□□□□□ -1.55
CLK1-215ENST00000621181 J3KRW8 73 aa5.36□□□□□ -1.55
CLK1-215ENST00000621181 CKS2P33552 79 aa5.36□□□□□ -1.55
CLK1-215ENST00000621181 ORM1P02763 201 aa5.35□□□□□ -1.55
CLK1-215ENST00000621181 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
CLK1-215ENST00000621181 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
CLK1-215ENST00000621181 Q6ZTI0 123 aa5.35□□□□□ -1.55
CLK1-215ENST00000621181 IFI27L1Q96BM0 104 aa5.35□□□□□ -1.55
CLK1-215ENST00000621181 C18orf15Q96N68 181 aa5.35□□□□□ -1.55
CLK1-215ENST00000621181 H0Y8G0 127 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 SNAI2O43623 268 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 NXPH4O95158 308 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 TNFRSF6BO95407 300 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 DNAH10OSP0CZ25 163 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
CLK1-215ENST00000621181 FCER1GP30273 86 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 CACNG7P62955 275 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 DAZ2Q13117 558 aaKnown RBP5.34□□□□□ -1.55
CLK1-215ENST00000621181 NFE4Q86UQ8 179 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 NRACQ8N912 160 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 VSIG2Q96IQ7 327 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 TNFRSF18Q9Y5U5 241 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 TRGV1A0A0A0MS02 117 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 TRAV12-3A0A0B4J271 114 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 KRTAP10-1P60331 282 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 ODF1Q14990 250 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 PRR9Q5T870 116 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 Q6ZQT7 251 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 Q6ZSN1 163 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 Q8N8P6 123 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 MAP1LC3AQ9H492 121 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 NXT2Q9NPJ8 142 aaKnown RBP5.34□□□□□ -1.55
CLK1-215ENST00000621181 MDFICQ9P1T7 246 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 HHLA3Q9XRX5 114 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 ICOSQ9Y6W8 199 aa5.34□□□□□ -1.55
CLK1-215ENST00000621181 A0A087WTM6 91 aa5.33□□□□□ -1.56
CLK1-215ENST00000621181 PAX4O43316 350 aa5.33□□□□□ -1.56
CLK1-215ENST00000621181 RBX1P62877 108 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms