RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RNASE6Q93091 150 aaKnown RBP3.82□□□□□ -1.8
VPS13D-214ENST00000620676 CCL19Q99731 98 aa3.82□□□□□ -1.8
VPS13D-214ENST00000620676 PLXNA2O75051 1894 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 C17orf82Q86X59 251 aaPredicted RBP3.81□□□□□ -1.8
VPS13D-214ENST00000620676 PROP1O75360 226 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 GNLYP22749 145 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 A6NED7 52 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 NPBQ8NG41 125 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 PRRC2AP48634 2157 aaKnown RBP3.81□□□□□ -1.8
VPS13D-214ENST00000620676 MIR7-3HGQ8N6C7 128 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV1-69DA0A0B4J2H0 117 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 VSIG2Q96IQ7 327 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV7-4-1A0A0J9YVY3 117 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 EIF4EBP1Q13541 118 aaPredicted RBP3.81□□□□□ -1.8
VPS13D-214ENST00000620676 NOP10Q9NPE3 64 aaKnown RBP3.81□□□□□ -1.8
VPS13D-214ENST00000620676 LINC00467Q9BRT7 94 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 EML6Q6ZMW3 1958 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV1-58A0A0C4DH39 117 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 C9orf139Q6ZV77 190 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 LINC01561Q8N1V8 128 aa3.81□□□□□ -1.8
VPS13D-214ENST00000620676 ZNF672Q499Z4 452 aaPredicted RBP3.8□□□□□ -1.8
VPS13D-214ENST00000620676 C11orf21Q9P2W6 132 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PRO0461Q9UI25 63 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 RMI2Q96E14 147 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PRORYQ9H606 182 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 TRBV7-6A0A0J9YX20 115 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 A0A0G2JNJ9 132 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV4-59P01825 116 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 Q9UFV3 132 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 CDKN2A-AS1Q9UH64 79 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PKD1L2Q7Z442 2459 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PRR9Q5T870 116 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 LINC00308Q8TCZ7 52 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 A0A087WYN8 130 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 SMAD5-AS1Q9Y6J3 95 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
VPS13D-214ENST00000620676 SMIM26A0A096LP01 95 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 DEFB123Q8N688 67 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 Q9UF83 564 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 ZNF462Q96JM2 2506 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 DNAJC9-AS1A6NH13 148 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 A0A096LNJ9 63 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
VPS13D-214ENST00000620676 PCNX3Q9H6A9 2034 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 MSMPQ1L6U9 139 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 HCFC1P51610 2035 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 Q8N7P7 452 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 FNDC1Q4ZHG4 1894 aaPredicted RBP3.79□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV4-30-4P0DP06 118 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 IGHV4-31P0DP07 118 aa3.79□□□□□ -1.8
VPS13D-214ENST00000620676 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 E7EQL1 145 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 MIFP14174 115 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
VPS13D-214ENST00000620676 LST1O00453 97 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 CD59P13987 128 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 BEAN1Q3B7T3 259 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 C3orf84H3BNL1 204 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 SP5Q6BEB4 398 aaPredicted RBP3.78□□□□□ -1.8
VPS13D-214ENST00000620676 WFDC10BQ8IUB3 73 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 NHLRC4P0CG21 123 aaPredicted RBP3.78□□□□□ -1.8
VPS13D-214ENST00000620676 NUP210Q8TEM1 1887 aaPredicted RBP3.78□□□□□ -1.8
VPS13D-214ENST00000620676 MDS2Q8NDY4 140 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 THADAQ6YHU6 1953 aa3.78□□□□□ -1.8
VPS13D-214ENST00000620676 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.78□□□□□ -1.81
VPS13D-214ENST00000620676 UBE2D3P61077 147 aa3.78□□□□□ -1.81
VPS13D-214ENST00000620676 UBE2D2P62837 147 aa3.78□□□□□ -1.81
VPS13D-214ENST00000620676 ABCA12Q86UK0 2595 aa3.78□□□□□ -1.81
VPS13D-214ENST00000620676 AGRNO00468 2067 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 BRI3O95415 125 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 TSHBP01222 138 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 UNQ9165/PRO28630Q6UXU0 137 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 RNF5Q99942 180 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 TRBV6-5A0A0K0K1A5 114 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 H3BUX3 64 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 DEFB4AO15263 64 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 LHBP01229 141 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 SMIM11BQ8TCY0 68 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 LTBP1Q14766 1721 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 LINC01619G3V211 115 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 BLCAPP62952 87 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 SEM1Q6ZVN7 128 aa3.77□□□□□ -1.81
VPS13D-214ENST00000620676 LY6G6EA0A0G2JKS1 128 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 C20orf203Q8NBC4 194 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 U3KQA8 63 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 MP68P56378 58 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 ZNF106Q9H2Y7 1883 aaKnown RBP3.76□□□□□ -1.81
VPS13D-214ENST00000620676 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 COX6A2Q02221 97 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 LINC00474Q9P2X8 69 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 ZNF561-AS1K7EIQ3 104 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 BPY2O14599 106 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 Q8N9L7 120 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 TRBV27A0A0K0K1C4 114 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 IGLV4-69A0A075B6H9 119 aa3.76□□□□□ -1.81
VPS13D-214ENST00000620676 IGLV4-3A0A075B6K6 122 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms