RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 TRAV2A0A0B4J234 112 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 RBMY1BA6NDE4 496 aaKnown RBP9.51□□□□□ -0.89
SKP2-209ENST00000620197 RBMY1EA6NEQ0 496 aaKnown RBP9.51□□□□□ -0.89
SKP2-209ENST00000620197 RBMY1DP0C7P1 496 aaKnown RBP9.51□□□□□ -0.89
SKP2-209ENST00000620197 ATXN8Q156A1 80 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 TEX29Q8N6K0 151 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 MIAQ16674 131 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 Q6ZSN1 163 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 NTN5Q8WTR8 489 aaPredicted RBP9.51□□□□□ -0.89
SKP2-209ENST00000620197 CCL19Q99731 98 aa9.51□□□□□ -0.89
SKP2-209ENST00000620197 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 Q9UF83 564 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 TEX49A0A1B0GTD5 131 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 FSHBP01225 129 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 PROK1P58294 105 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 GAGE5Q13069 117 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 GAGE6Q13070 117 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 LY6DQ14210 128 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 C11orf72Q8NBR9 251 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
SKP2-209ENST00000620197 PRRC2AP48634 2157 aaKnown RBP9.49□□□□□ -0.89
SKP2-209ENST00000620197 NDUFV3P56181 108 aaKnown RBP9.49□□□□□ -0.89
SKP2-209ENST00000620197 Q6Q795 121 aa9.49□□□□□ -0.89
SKP2-209ENST00000620197 USP9YO00507 2555 aaPredicted RBP9.49□□□□□ -0.89
SKP2-209ENST00000620197 IGHV4-59P01825 116 aa9.49□□□□□ -0.89
SKP2-209ENST00000620197 GNLYP22749 145 aa9.49□□□□□ -0.89
SKP2-209ENST00000620197 BEAN1Q3B7T3 259 aa9.49□□□□□ -0.89
SKP2-209ENST00000620197 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
SKP2-209ENST00000620197 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 H7C2G1 150 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 MXRA5Q9NR99 2828 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 B4DSR2 109 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 H7C423 109 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 DEFB112Q30KQ8 113 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 ICOSQ9Y6W8 199 aa9.48□□□□□ -0.89
SKP2-209ENST00000620197 POLQO75417 2590 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 IGKV3-20P01619 116 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 CD28P10747 220 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 CEMP1Q6PRD7 247 aaPredicted RBP9.47□□□□□ -0.89
SKP2-209ENST00000620197 TMEM61Q8N0U2 210 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 UBE2E2Q96LR5 201 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 H3BMM0 161 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 IL17DQ8TAD2 202 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 SPXQ9BT56 116 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 ZNF702PQ9H963 129 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 TLN2Q9Y4G6 2542 aa9.47□□□□□ -0.89
SKP2-209ENST00000620197 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.89
SKP2-209ENST00000620197 HOXD3P31249 432 aaPredicted RBP9.46□□□□□ -0.89
SKP2-209ENST00000620197 SYNJ2BPP57105 145 aa9.46□□□□□ -0.89
SKP2-209ENST00000620197 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.89
SKP2-209ENST00000620197 TIRAPP58753 221 aa9.46□□□□□ -0.89
SKP2-209ENST00000620197 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.46□□□□□ -0.89
SKP2-209ENST00000620197 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.89
SKP2-209ENST00000620197 CACNA1AO00555 2505 aa9.46□□□□□ -0.9
SKP2-209ENST00000620197 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
SKP2-209ENST00000620197 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
SKP2-209ENST00000620197 FBN2P35556 2912 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 B5MCH6 92 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 LST1O00453 97 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 NDUFA1O15239 70 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 H3BT86 120 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 IGHV3-53P01767 116 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 PTPN13Q12923 2485 aa9.45□□□□□ -0.9
SKP2-209ENST00000620197 CCDC179H3BU77 68 aa9.44□□□□□ -0.9
SKP2-209ENST00000620197 Q6ZSV7 163 aa9.44□□□□□ -0.9
SKP2-209ENST00000620197 Q8N2B8 174 aa9.44□□□□□ -0.9
SKP2-209ENST00000620197 CITED2Q99967 270 aaPredicted RBP9.44□□□□□ -0.9
SKP2-209ENST00000620197 SNCGO76070 127 aa9.44□□□□□ -0.9
SKP2-209ENST00000620197 IFITM1P13164 125 aa9.44□□□□□ -0.9
SKP2-209ENST00000620197 A8MZ25 164 aa9.43□□□□□ -0.9
SKP2-209ENST00000620197 RS1O15537 224 aa9.43□□□□□ -0.9
SKP2-209ENST00000620197 ATP5J2P56134 94 aa9.43□□□□□ -0.9
SKP2-209ENST00000620197 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
SKP2-209ENST00000620197 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
SKP2-209ENST00000620197 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 J3QLI3 93 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 DSCR9P59020 149 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 Q6YL49 198 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 UBE2WQ96B02 151 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 BEX4Q9NWD9 120 aaPredicted RBP9.42□□□□□ -0.9
SKP2-209ENST00000620197 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 MYO9AB2RTY4 2548 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 CR1P17927 2039 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 C15orf53Q8NAA6 179 aa9.42□□□□□ -0.9
SKP2-209ENST00000620197 TRAV8-4A0A0B4J246 113 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 PRM2P04554 102 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 Q1RN00 199 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 FAM208BQ5VWN6 2430 aa9.41□□□□□ -0.9
SKP2-209ENST00000620197 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms