RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 F8W1H4 67 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 HOXA3O43365 443 aaPredicted RBP3.15□□□□□ -1.91
SEC22B-202ENST00000618538 TGFAP01135 160 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 CFC1P0CG37 223 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 ZNF22P17026 224 aaPredicted RBP3.15□□□□□ -1.91
SEC22B-202ENST00000618538 UBE2D3P61077 147 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 UBE2D2P62837 147 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 CFAP126Q5VTH2 177 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 SCGB1D4Q6XE38 83 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 NDUFA11Q86Y39 141 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 C10orf126Q8N4M7 172 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 LINC01356Q8N9X3 169 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM141Q96I45 108 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 BBC3Q96PG8 261 aaPredicted RBP3.15□□□□□ -1.91
SEC22B-202ENST00000618538 KIR2DL4Q99706 377 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 VPREB3Q9UKI3 123 aa3.15□□□□□ -1.91
SEC22B-202ENST00000618538 TSSC4Q9Y5U2 329 aaPredicted RBP3.15□□□□□ -1.91
SEC22B-202ENST00000618538 WNK1Q9H4A3 2382 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
SEC22B-202ENST00000618538 A0A0J9YXV3 536 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM89A2RUT3 159 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM238C9JI98 176 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 J3QQQ9 107 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 APOMO95445 188 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 ELANEP08246 267 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 GATA3P23771 443 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 SNRPD3P62318 126 aaKnown RBP3.14□□□□□ -1.91
SEC22B-202ENST00000618538 RNASE13Q5GAN3 156 aaKnown RBP3.14□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM170BQ5T4T1 132 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 Q6YL49 198 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 SLC25A29Q8N8R3 303 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 PTH2Q96A98 100 aa3.14□□□□□ -1.91
SEC22B-202ENST00000618538 MRPL16Q9NX20 251 aaKnown RBP3.14□□□□□ -1.91
SEC22B-202ENST00000618538 TCL1BO95988 128 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 DEFB131AP59861 70 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 SRSF9Q13242 221 aaKnown RBP eCLIP3.13□□□□□ -1.91
SEC22B-202ENST00000618538 RHOHQ15669 191 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 GAGE13Q4V321 117 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 TRPT1Q86TN4 253 aaKnown RBP3.13□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM61Q8N0U2 210 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 LITAFQ99732 161 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 GTSF1LQ9H1H1 148 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 MTORP42345 2549 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 TRAV8-3A0A0A6YYJ7 113 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 A8MZ25 164 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 H3BMM0 161 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 RHODO00212 210 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 CD28P10747 220 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 HTN1P15515 57 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 SCGB2A2Q13296 93 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 SAMD13Q5VXD3 122 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 C11orf72Q8NBR9 251 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 SYT8Q8NBV8 401 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 CARD19Q96LW7 228 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 SPATA25Q9BR10 227 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 CHCHD7Q9BUK0 85 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 EDA2RQ9HAV5 297 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 C2CD3Q4AC94 2353 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 NOTCH3Q9UM47 2321 aa3.13□□□□□ -1.91
SEC22B-202ENST00000618538 ACANP16112 2415 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 A4D1N5 150 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 GAGE12HA6NDE8 117 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 I3L3M4 83 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 LEPROTO15243 131 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 AZU1P20160 251 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 DSCR9P59020 149 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 HERVK_113P61574 105 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 PAPPA-AS1Q5QFB9 102 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.12□□□□□ -1.91
SEC22B-202ENST00000618538 TMEM263Q8WUH6 116 aaKnown RBP3.12□□□□□ -1.91
SEC22B-202ENST00000618538 DLX4Q92988 240 aaPredicted RBP3.12□□□□□ -1.91
SEC22B-202ENST00000618538 CDIP1Q9H305 208 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 MAP6D1Q9H9H5 199 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 UNC79Q9P2D8 2635 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 PDZD2O15018 2839 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 TRGV11A0A075B6L2 103 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 LOC107984156A0A0G2JMH3 177 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 A0A0J9YXY3 114 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 J3QLI3 93 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 PSMB2P49721 201 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 MRPS36P82909 103 aaKnown RBP3.12□□□□□ -1.91
SEC22B-202ENST00000618538 SMAGPQ0VAQ4 97 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 Q5PR19 223 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 ADAMTSL4-AS1Q5T5F5 129 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 Q6ZUT4 128 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 ARL17AQ8IVW1 177 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 Q8N2B8 174 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 ZNF418Q8TF45 676 aaPredicted RBP3.12□□□□□ -1.91
SEC22B-202ENST00000618538 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 ITPR2Q14571 2701 aa3.12□□□□□ -1.91
SEC22B-202ENST00000618538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
SEC22B-202ENST00000618538 IGHV3-38A0A0C4DH36 116 aa3.11□□□□□ -1.91
SEC22B-202ENST00000618538 IGKV2-29A2NJV5 120 aaPredicted RBP3.11□□□□□ -1.91
SEC22B-202ENST00000618538 M0R2P5 195 aa3.11□□□□□ -1.91
SEC22B-202ENST00000618538 IGHV3-30-3P0DP02 117 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms