RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 C6orf226Q5I0X4 101 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 TSHBP01222 138 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 HIST2H2BCQ6DN03 193 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 HIST2H2BDQ6DRA6 164 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 SAP25Q8TEE9 199 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 KLK9Q9UKQ9 250 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 NOTCH3Q9UM47 2321 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 CACNA1EQ15878 2313 aa5.52□□□□□ -1.53
PDE6A-205ENST00000617647 PRRC2AP48634 2157 aaKnown RBP5.52□□□□□ -1.53
PDE6A-205ENST00000617647 A0A0J9YX75 114 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 H0YGX0 51 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 TMEM178BH3BS89 294 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 DEFB1P60022 68 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 ATP5EP2Q5VTU8 51 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 C9orf106Q8NAJ2 232 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.51□□□□□ -1.53
PDE6A-205ENST00000617647 IGKV2-29A2NJV5 120 aaPredicted RBP5.51□□□□□ -1.53
PDE6A-205ENST00000617647 IGF1P05019 195 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 ARRDC1-AS1Q9H2J1 176 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 MALRD1Q5VYJ5 2156 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 IGLV4-3A0A075B6K6 122 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 TRAV7A0A075B6U4 112 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 LRCOL1A6NCL2 159 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 CDSNQ15517 529 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 OVOL3O00110 214 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 UBE2L6O14933 153 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 SND1-IT1Q9HBX3 110 aa5.51□□□□□ -1.53
PDE6A-205ENST00000617647 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-205ENST00000617647 IGHG3P01860 377 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 FUSP35637 526 aaKnown RBP eCLIP5.5□□□□□ -1.53
PDE6A-205ENST00000617647 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-205ENST00000617647 VMO1Q7Z5L0 202 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 SMAD5-AS1Q9Y6J3 95 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 PTPRZ1P23471 2315 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-205ENST00000617647 PCNX1Q96RV3 2341 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 PTPRQQ9UMZ3 2332 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 NDUFC1O43677 76 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
PDE6A-205ENST00000617647 LHBP01229 141 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 FAM222AQ5U5X8 452 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 MED13LQ71F56 2210 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 CTSGP08311 255 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 LINC00482Q8N8I6 264 aa5.5□□□□□ -1.53
PDE6A-205ENST00000617647 COL6A6A6NMZ7 2263 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 CCKP06307 115 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
PDE6A-205ENST00000617647 RNF5Q99942 180 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 TMEM89A2RUT3 159 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 JMJD7-PLA2G4BH0Y9G9 81 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 C9orf47Q6ZRZ4 202 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 VCANP13611 3396 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 MYO15AQ9UKN7 3530 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 IGHV4-4A0A075B6R2 117 aa5.49□□□□□ -1.53
PDE6A-205ENST00000617647 DSCAMO60469 2012 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 MIFP14174 115 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 POLR2KP53803 58 aaKnown RBP5.48□□□□□ -1.53
PDE6A-205ENST00000617647 COX8CQ7Z4L0 72 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 PRSS33Q8NF86 280 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 CNOT1A5YKK6 2376 aaKnown RBP5.48□□□□□ -1.53
PDE6A-205ENST00000617647 A0A087WZ39 114 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 KHDC1LQ5JSQ8 128 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 MRPL53Q96EL3 112 aaKnown RBP5.48□□□□□ -1.53
PDE6A-205ENST00000617647 LENEPQ9Y5L5 61 aa5.48□□□□□ -1.53
PDE6A-205ENST00000617647 IGLV11-55A0A075B6I3 123 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 IGHV3-11P01762 117 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 PRR9Q5T870 116 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 SCXQ7RTU7 201 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 MIR7-3HGQ8N6C7 128 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 PSMG3-AS1Q96PY0 264 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 AMELXQ99217 191 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 LYNX1G3V0Z9 82 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 LYNX1P0DP58 116 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 SAA4P35542 130 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 MSMPQ1L6U9 139 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 GPHB5Q86YW7 130 aa5.47□□□□□ -1.53
PDE6A-205ENST00000617647 PSPHP1O15172 72 aa5.46□□□□□ -1.53
PDE6A-205ENST00000617647 ATP1A1-AS1Q5TC04 95 aa5.46□□□□□ -1.53
PDE6A-205ENST00000617647 Q8N2B8 174 aa5.46□□□□□ -1.54
PDE6A-205ENST00000617647 WDFY3Q8IZQ1 3526 aa5.46□□□□□ -1.54
PDE6A-205ENST00000617647 DEFB109BQ30KR1 87 aa5.46□□□□□ -1.54
PDE6A-205ENST00000617647 A0A087WYN8 130 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 NDUFA1O15239 70 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 SPTA1P02549 2419 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 IGHV3OR16-10A0A075B7F0 116 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 MED14OSP0DP75 135 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 EYSQ5T1H1 3165 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 GVINP1Q7Z2Y8 2422 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 C2CD3Q4AC94 2353 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 IGHV3-16A0A0C4DH30 117 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 IGLV1-44P01699 117 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 CD164Q04900 197 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 LINC00574Q9H8X3 128 aa5.45□□□□□ -1.54
PDE6A-205ENST00000617647 IGLV3-9A0A075B6K5 115 aa5.44□□□□□ -1.54
PDE6A-205ENST00000617647 IGHV4OR15-8A0A075B7B6 117 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms