RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 HHLA3Q9XRX5 114 aa6.63□□□□□ -1.35
PDLIM5-222ENST00000615540 E9PLD3 99 aa6.63□□□□□ -1.35
PDLIM5-222ENST00000615540 F8W1H4 67 aa6.63□□□□□ -1.35
PDLIM5-222ENST00000615540 UBE2WQ96B02 151 aa6.63□□□□□ -1.35
PDLIM5-222ENST00000615540 PLXNB1O43157 2135 aa6.63□□□□□ -1.35
PDLIM5-222ENST00000615540 ADGRG4Q8IZF6 3080 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 A4D1N5 150 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 LY6G6DO95868 133 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 CFAP126Q5VTH2 177 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 BSNQ9UPA5 3926 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 DMXL2Q8TDJ6 3036 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 DAZ2Q13117 558 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 DAZ4Q86SG3 579 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 DAZ3Q9NR90 486 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 SLC25A20O43772 301 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 ABCA1O95477 2261 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 C20orf203Q8NBC4 194 aa6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 TMEM263Q8WUH6 116 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-222ENST00000615540 AKAP13Q12802 2813 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 ATP6V0E2Q8NHE4 81 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 BBC3Q96PG8 261 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 TIMM17AQ99595 171 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 CUBNO60494 3623 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 A8MZ25 164 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 M0QY20 66 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 CFC1P0CG37 223 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 PLA2G2AP14555 144 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 SLC25A29Q8N8R3 303 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 PLCE1Q9P212 2302 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 TRAV25A0A0B4J276 109 aa6.61□□□□□ -1.35
PDLIM5-222ENST00000615540 TRAV4A0A0B4J268 109 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 ZNF561-AS1K7EIQ3 104 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 ODF3Q96PU9 254 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 LAMTOR3Q9UHA4 124 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 PRB2P02812 416 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 LRBAP50851 2863 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 LOC100131303A0A0U1RQF7 123 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 COX7B2Q8TF08 81 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 CLEC2BQ92478 149 aa6.6□□□□□ -1.35
PDLIM5-222ENST00000615540 PSCAO43653 123 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 ATRXP46100 2492 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 ABCA4P78363 2273 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 WFDC2Q14508 124 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 ICOSQ9Y6W8 199 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 NCR3O14931 201 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 KLLNB2CW77 178 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 NDUFA11Q86Y39 141 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 Q9HAA7 133 aa6.59□□□□□ -1.35
PDLIM5-222ENST00000615540 TSHBP01222 138 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 TEX48A0A1B0GUV7 120 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 ZFAND6Q6FIF0 208 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 SOCS3O14543 225 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 VSIG2Q96IQ7 327 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 SPTAN1Q13813 2472 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 TNCP24821 2201 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 IGHV4-4A0A075B6R2 117 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 PRSS47A8MTI9 375 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 EDA2RQ9HAV5 297 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 IGF2RP11717 2491 aa6.58□□□□□ -1.36
PDLIM5-222ENST00000615540 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 NBEAQ8NFP9 2946 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 IGKV2D-24A0A075B6R9 120 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
PDLIM5-222ENST00000615540 C15orf53Q8NAA6 179 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 C9orf85Q96MD7 179 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 GAGE12HA6NDE8 117 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 PTH2Q96A98 100 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 ATP5G1P05496 136 aa6.56□□□□□ -1.36
PDLIM5-222ENST00000615540 TINCRA0A1B0GVN0 87 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 RS1O15537 224 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 ZNF22P17026 224 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 TRAV13-2A0A0B4J235 113 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 CRYGDP07320 174 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 SPART-AS1P0CW21 52 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 CRIP2P52943 208 aaPredicted RBP6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 TCL1BO95988 128 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 ANKRD29Q8N6D5 301 aa6.55□□□□□ -1.36
PDLIM5-222ENST00000615540 TRAV26-1A0A087WT03 109 aa6.54□□□□□ -1.36
PDLIM5-222ENST00000615540 A0A096LNJ9 63 aa6.54□□□□□ -1.36
PDLIM5-222ENST00000615540 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
PDLIM5-222ENST00000615540 PTPRQQ9UMZ3 2332 aa6.54□□□□□ -1.36
PDLIM5-222ENST00000615540 SND1-IT1Q9HBX3 110 aa6.54□□□□□ -1.36
PDLIM5-222ENST00000615540 NAV3Q8IVL0 2385 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms