RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 KMT2BQ9UMN6 2715 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 LINC01549A6NIU2 74 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 HERVK_113P61574 105 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 OCIAD2Q56VL3 154 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 C2CD3Q4AC94 2353 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 IGKV2-29A2NJV5 120 aaPredicted RBP14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 IGLL5B9A064 214 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 J3QKU1 62 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 SAP30O75446 220 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 SRSF9Q13242 221 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 PAPPA-AS1Q5QFB9 102 aa14.31□□□□□ -0.12
SMARCD2-212ENST00000613943 VCX2Q9H322 139 aa14.3□□□□□ -0.12
SMARCD2-212ENST00000613943 TEX29Q8N6K0 151 aa14.3□□□□□ -0.12
SMARCD2-212ENST00000613943 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
SMARCD2-212ENST00000613943 GCN1Q92616 2671 aaKnown RBP14.29□□□□□ -0.12
SMARCD2-212ENST00000613943 IGHV3-53P01767 116 aa14.29□□□□□ -0.12
SMARCD2-212ENST00000613943 TRGV1A0A0A0MS02 117 aa14.28□□□□□ -0.12
SMARCD2-212ENST00000613943 A0A0J9YY99 117 aa14.28□□□□□ -0.12
SMARCD2-212ENST00000613943 ZNF479Q96JC4 524 aa14.28□□□□□ -0.12
SMARCD2-212ENST00000613943 J3QQQ9 107 aa14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 ZNF22P17026 224 aaPredicted RBP14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 SFTA2Q6UW10 78 aa14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 NFE4Q86UQ8 179 aa14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 AMELXQ99217 191 aa14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 HIVEP2P31629 2446 aa14.27□□□□□ -0.12
SMARCD2-212ENST00000613943 RNASE1P07998 156 aaKnown RBP14.27□□□□□ -0.13
SMARCD2-212ENST00000613943 CHCHD7Q9BUK0 85 aa14.27□□□□□ -0.13
SMARCD2-212ENST00000613943 EDA2RQ9HAV5 297 aa14.27□□□□□ -0.13
SMARCD2-212ENST00000613943 LINC00467Q9BRT7 94 aa14.26□□□□□ -0.13
SMARCD2-212ENST00000613943 TMEM223A0PJW6 202 aa14.26□□□□□ -0.13
SMARCD2-212ENST00000613943 MTURNQ8N3F0 131 aa14.26□□□□□ -0.13
SMARCD2-212ENST00000613943 TRAV25A0A0B4J276 109 aa14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 RHODO00212 210 aa14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 SPXQ9BT56 116 aa14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 ADARB2-AS1A8MUL3 147 aa14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 LGALS3P17931 250 aaKnown RBP14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 Q6ZTI0 123 aa14.25□□□□□ -0.13
SMARCD2-212ENST00000613943 APOMO95445 188 aa14.24□□□□□ -0.13
SMARCD2-212ENST00000613943 BEAN1Q3B7T3 259 aa14.24□□□□□ -0.13
SMARCD2-212ENST00000613943 RS1O15537 224 aa14.24□□□□□ -0.13
SMARCD2-212ENST00000613943 TRAV8-3A0A0A6YYJ7 113 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 OR5A1Q8NGJ0 315 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 PGPEP1Q9NXJ5 209 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 H3BMG7 143 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 GIG44P09565 113 aaPredicted RBP14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 RRN3P1Q2M238 152 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 Q6ZUT4 128 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
SMARCD2-212ENST00000613943 A0A1B0GWB2 263 aa14.22□□□□□ -0.13
SMARCD2-212ENST00000613943 A8MZ25 164 aa14.21□□□□□ -0.13
SMARCD2-212ENST00000613943 C16orf95Q9H693 158 aa14.21□□□□□ -0.13
SMARCD2-212ENST00000613943 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
SMARCD2-212ENST00000613943 NOP10Q9NPE3 64 aaKnown RBP14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 CBY1Q9Y3M2 126 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 PYGO1Q9Y3Y4 419 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 IGHV3-30P01768 117 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 IGHV3-30-5P0DP03 117 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 IL17DQ8TAD2 202 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 PTH2Q96A98 100 aa14.2□□□□□ -0.14
SMARCD2-212ENST00000613943 LEPROTO15243 131 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 COTL1Q14019 142 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 SLC25A29Q8N8R3 303 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 OTOGQ6ZRI0 2925 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 FN1P02751 2386 aaKnown RBP14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 HILS1P60008 231 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 CLUHP3Q96NS8 147 aa14.19□□□□□ -0.14
SMARCD2-212ENST00000613943 UBE2D1P51668 147 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 C10orf126Q8N4M7 172 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 ZNF418Q8TF45 676 aaPredicted RBP14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 VPS25Q9BRG1 176 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 VWFP04275 2813 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 KRTAP10-3P60369 221 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 MRPS36P82909 103 aaKnown RBP14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 C21orf62-AS1Q17RA5 79 aa14.18□□□□□ -0.14
SMARCD2-212ENST00000613943 IGLV1-51P01701 117 aa14.17□□□□□ -0.14
SMARCD2-212ENST00000613943 IGHV3-30-3P0DP02 117 aa14.17□□□□□ -0.14
SMARCD2-212ENST00000613943 C19orf73Q9NVV2 129 aa14.17□□□□□ -0.14
SMARCD2-212ENST00000613943 SPINK8P0C7L1 97 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 TMEM238LA0A1B0GVL6 79 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 A6NJY4 79 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 TSPAN13O95857 204 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 LINC00694P0DN24 101 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 WFDC2Q14508 124 aa14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 TMEM263Q8WUH6 116 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-212ENST00000613943 NDUFA7O95182 113 aa14.15□□□□□ -0.14
SMARCD2-212ENST00000613943 TIMM21Q9BVV7 248 aa14.15□□□□□ -0.14
SMARCD2-212ENST00000613943 K7ERU9 68 aa14.15□□□□□ -0.14
SMARCD2-212ENST00000613943 CFC1BP0CG36 223 aa14.15□□□□□ -0.14
SMARCD2-212ENST00000613943 CFC1P0CG37 223 aa14.15□□□□□ -0.14
SMARCD2-212ENST00000613943 RPL24P83731 157 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 DNAJC30Q96LL9 226 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 SPANXB1Q9NS25 103 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 LOC107984156A0A0G2JMH3 177 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE12JA6NER3 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE7O76087 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE12FP0CL80 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE12GP0CL81 117 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms