RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
PCDHGA3-202ENST00000612467 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
PCDHGA3-202ENST00000612467 IGLV4-3A0A075B6K6 122 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 IGKV2-29A2NJV5 120 aaPredicted RBP10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 ADARB2-AS1A8MUL3 147 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 CFAP126Q5VTH2 177 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 GCN1Q92616 2671 aaKnown RBP10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 KRTAP1-1Q07627 177 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 SMR3AQ99954 134 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 YAE1D1Q9NRH1 226 aa10.22□□□□□ -0.77
PCDHGA3-202ENST00000612467 H3BMG7 143 aa10.21□□□□□ -0.77
PCDHGA3-202ENST00000612467 M0R2P5 195 aa10.21□□□□□ -0.77
PCDHGA3-202ENST00000612467 CCL24O00175 119 aa10.21□□□□□ -0.77
PCDHGA3-202ENST00000612467 APOMO95445 188 aa10.21□□□□□ -0.77
PCDHGA3-202ENST00000612467 SMAGPQ0VAQ4 97 aa10.21□□□□□ -0.77
PCDHGA3-202ENST00000612467 IGHV3-53P01767 116 aa10.21□□□□□ -0.78
PCDHGA3-202ENST00000612467 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.78
PCDHGA3-202ENST00000612467 A0A0J9YY99 117 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 A8MTW9 85 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 A8MZ25 164 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 ZNF415Q09FC8 603 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 RHOHQ15669 191 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 AMELXQ99217 191 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 VWFP04275 2813 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 NBEAL2Q6ZNJ1 2754 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 TAL2Q16559 108 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 C1orf158Q8N1D5 194 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 SPXQ9BT56 116 aa10.2□□□□□ -0.78
PCDHGA3-202ENST00000612467 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 J3QQQ9 107 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 PLA2G2AP14555 144 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 VCX2Q9H322 139 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 PGPEP1Q9NXJ5 209 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 HERVK_113P61574 105 aa10.19□□□□□ -0.78
PCDHGA3-202ENST00000612467 INSP01308 110 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 WFDC2Q14508 124 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 STHQ8IWL8 128 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 LINC01006Q8NI28 216 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 LINC00467Q9BRT7 94 aa10.18□□□□□ -0.78
PCDHGA3-202ENST00000612467 HIVEP2P31629 2446 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 TRGV1A0A0A0MS02 117 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 A8MWV9 139 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 RHODO00212 210 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 CHCHD7Q9BUK0 85 aa10.17□□□□□ -0.78
PCDHGA3-202ENST00000612467 LGALS3P17931 250 aaKnown RBP10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 FHL3Q13643 280 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 TRAV2A0A0B4J234 112 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 Q6ZTI0 123 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 Q6ZUT4 128 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 NFE4Q86UQ8 179 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 OTOGQ6ZRI0 2925 aa10.16□□□□□ -0.78
PCDHGA3-202ENST00000612467 SH2D6Q7Z4S9 175 aa10.15□□□□□ -0.78
PCDHGA3-202ENST00000612467 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
PCDHGA3-202ENST00000612467 NDUFA7O95182 113 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 TSSC4Q9Y5U2 329 aaPredicted RBP10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 TSPAN13O95857 204 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 IGHV3-30P01768 117 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 IGHV3-30-5P0DP03 117 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 C10orf126Q8N4M7 172 aa10.14□□□□□ -0.79
PCDHGA3-202ENST00000612467 EIF4EBP3O60516 100 aaPredicted RBP10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 UBE2D1P51668 147 aa10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 SLC25A29Q8N8R3 303 aa10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 SPINK8P0C7L1 97 aa10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 NPC2P61916 151 aa10.13□□□□□ -0.79
PCDHGA3-202ENST00000612467 H7C2G1 150 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 GIG44P09565 113 aaPredicted RBP10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 CFC1P0CG37 223 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 LEPROTO15243 131 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 RS1O15537 224 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 IGHV3-30-3P0DP02 117 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 ETDBQ3ZM63 59 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 NDUFA11Q86Y39 141 aa10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
PCDHGA3-202ENST00000612467 BEAN1Q3B7T3 259 aa10.11□□□□□ -0.79
PCDHGA3-202ENST00000612467 SIGMAR1Q99720 223 aa10.11□□□□□ -0.79
PCDHGA3-202ENST00000612467 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.11□□□□□ -0.79
PCDHGA3-202ENST00000612467 A4D1N5 150 aa10.1□□□□□ -0.79
PCDHGA3-202ENST00000612467 INSL3P51460 131 aa10.1□□□□□ -0.79
PCDHGA3-202ENST00000612467 PSMB2P49721 201 aa10.1□□□□□ -0.79
PCDHGA3-202ENST00000612467 MUSTN1Q8IVN3 82 aa10.1□□□□□ -0.79
PCDHGA3-202ENST00000612467 EDA2RQ9HAV5 297 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms