RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 NTF3P20783 257 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 SRIP30626 198 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 RPL37AP61513 92 aaKnown RBP4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 Q6ZRU5 148 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 SMIM15Q7Z3B0 74 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 NEGR1Q7Z3B1 354 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 SLC25A29Q8N8R3 303 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 GTSF1Q8WW33 167 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 ANAPC16Q96DE5 110 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 AP5S1Q9NUS5 200 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 NAT8BQ9UHF3 227 aa4.72□□□□□ -1.65
PTCHD3P1-201ENST00000612350 A0A1B0GUT8 65 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 A0A1B0GW15 77 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SMIM27A0A1W2PRY6 76 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 H7C1H1 209 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 K7EQD1 137 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MT-ND4LP03901 98 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GYPEP15421 78 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TIRAPP58753 221 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TWIST1Q15672 202 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 LYPD5Q6UWN5 251 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SAMD10Q9BYL1 202 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 JPT2Q9H910 190 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 KIF25-AS1Q9Y6Z4 181 aa4.71□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MUC2Q02817 5179 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 A0A087WWL8 130 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 IGHV3-73A0A0B4J1V6 119 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 RIGQ13278 110 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 LINC01620Q4KN68 170 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 C10orf91Q5T1B1 145 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 IMMP2LQ96T52 175 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TRBV7-3A0A075B6L6 115 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MUC21A0A0G2JKD1 596 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MUC21A0A140T8X8 626 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 F5H697 171 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 PSCAO43653 123 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 S100A8P05109 93 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 ADCYAP1P18509 176 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 EVI2AP22794 236 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 WFDC2Q14508 124 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 ZNF56Q15929 161 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 ATP5L2Q7Z4Y8 100 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 NUP35Q8NFH5 326 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 DNAJC30Q96LL9 226 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TMEM242Q9NWH2 141 aa4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 CARHSP1Q9Y2V2 147 aaKnown RBP4.69□□□□□ -1.66
PTCHD3P1-201ENST00000612350 LPAP08519 4548 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 A0A087WWC5 75 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 A0A0U1RQV1 116 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 LINC00694P0DN24 101 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SSTP61278 116 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 RHEBQ15382 184 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 DAZ4Q86SG3 579 aaKnown RBP4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 ATP6V0E2Q8NHE4 81 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TMEM191AQ9H0A3 160 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GTSF1LQ9H1H1 148 aa4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 DAZ3Q9NR90 486 aaKnown RBP4.68□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TRAV9-1A0A075B6T8 112 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 LOC100131303A0A0U1RQF7 123 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GAGE12JA6NER3 117 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 M0QY20 66 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 PPP1R17O96001 155 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MGPP08493 103 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 UBE2D3P61077 147 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 UBE2D2P62837 147 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GAGE1Q13065 139 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GAGE4Q13068 117 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GAGE5Q13069 117 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GAGE13Q4V321 117 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 ANKRD39Q53RE8 183 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 KCNIP4Q6PIL6 250 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 RASL11AQ6T310 242 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 C10orf126Q8N4M7 172 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 NIT2Q9NQR4 276 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
PTCHD3P1-201ENST00000612350 TRAV8-6A0A0B4J262 113 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 HBBP68871 147 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 GATD1Q8NB37 220 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 CLRN3Q8NCR9 226 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 MRAP2Q96G30 205 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 SMCO4Q9NRQ5 59 aa4.66□□□□□ -1.66
PTCHD3P1-201ENST00000612350 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 A0A1B0GXF2 115 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 C7orf77A4D0Y5 90 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 IBA57-AS1B1ANH7 110 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 RAB4AP20338 218 aa4.65□□□□□ -1.67
PTCHD3P1-201ENST00000612350 S100PP25815 95 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms