RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 RGS21Q2M5E4 152 aa8.47□□□□□ -1.05
HMGB1P24-201ENST00000611897 GTSF1Q8WW33 167 aa8.47□□□□□ -1.05
HMGB1P24-201ENST00000611897 MANBALQ9NQG1 85 aa8.47□□□□□ -1.05
HMGB1P24-201ENST00000611897 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 XKRY2A2RUG3 117 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 GNG4P50150 75 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 CCL20P78556 96 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 MAJINQ3KP22 176 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 LYZL1Q6UWQ5 148 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 C15orf56Q8N910 161 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 C11orf52Q96A22 123 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 RNF185Q96GF1 192 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 NIT2Q9NQR4 276 aa8.46□□□□□ -1.06
HMGB1P24-201ENST00000611897 IFNA1P01562 189 aa8.45□□□□□ -1.06
HMGB1P24-201ENST00000611897 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
HMGB1P24-201ENST00000611897 LYPD6BQ8NI32 183 aa8.45□□□□□ -1.06
HMGB1P24-201ENST00000611897 TRAV26-2A0A0B4J265 109 aa8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 C19orf71A6NCJ1 209 aa8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 EIF5AP63241 154 aaKnown RBP8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 ODF1Q14990 250 aa8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
HMGB1P24-201ENST00000611897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 F2Z2F3 143 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 NTF3P20783 257 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 RPS10P46783 165 aaKnown RBP8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 TWIST1Q15672 202 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 MED9Q9NWA0 146 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
HMGB1P24-201ENST00000611897 STPG4Q8N801 248 aa8.42□□□□□ -1.06
HMGB1P24-201ENST00000611897 CHCHD10Q8WYQ3 142 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P24-201ENST00000611897 LRP2P98164 4655 aa8.42□□□□□ -1.06
HMGB1P24-201ENST00000611897 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
HMGB1P24-201ENST00000611897 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
HMGB1P24-201ENST00000611897 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
HMGB1P24-201ENST00000611897 Q6ZNX1 250 aa8.41□□□□□ -1.06
HMGB1P24-201ENST00000611897 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
HMGB1P24-201ENST00000611897 TRBV20OR9-2A0A075B6H5 130 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 A0A096LNI7 61 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 HMSDA8MTL9 139 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 APCSP02743 223 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 CTRLP40313 264 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
HMGB1P24-201ENST00000611897 PDE6DO43924 150 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 XCL1P47992 114 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 NUDT10Q8NFP7 164 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 SMIM12Q96EX1 92 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 NUDT11Q96G61 164 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 BIN3Q9NQY0 253 aa8.39□□□□□ -1.07
HMGB1P24-201ENST00000611897 FGF6P10767 208 aa8.38□□□□□ -1.07
HMGB1P24-201ENST00000611897 SMIM15Q7Z3B0 74 aa8.38□□□□□ -1.07
HMGB1P24-201ENST00000611897 RNASE7Q9H1E1 156 aaKnown RBP8.38□□□□□ -1.07
HMGB1P24-201ENST00000611897 RPP21Q9H633 154 aaKnown RBP8.38□□□□□ -1.07
HMGB1P24-201ENST00000611897 GVQW2A0A096LPI5 108 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 TRAV1-1A0A0B4J248 108 aa8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 BCL2P10415 239 aa8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 FOXA3P55318 350 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 C9orf62Q8N4C0 152 aa8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 BTF3L4Q96K17 158 aa8.37□□□□□ -1.07
HMGB1P24-201ENST00000611897 SDHAF1A6NFY7 115 aa8.36□□□□□ -1.07
HMGB1P24-201ENST00000611897 CCL25O15444 150 aa8.36□□□□□ -1.07
HMGB1P24-201ENST00000611897 EIF5AL1Q6IS14 154 aaKnown RBP8.36□□□□□ -1.07
HMGB1P24-201ENST00000611897 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
HMGB1P24-201ENST00000611897 LINC01600Q96MT4 127 aa8.36□□□□□ -1.07
HMGB1P24-201ENST00000611897 NCR2O95944 276 aa8.35□□□□□ -1.07
HMGB1P24-201ENST00000611897 PMCHP20382 165 aa8.35□□□□□ -1.07
HMGB1P24-201ENST00000611897 FOXI1Q12951 378 aa8.35□□□□□ -1.07
HMGB1P24-201ENST00000611897 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
HMGB1P24-201ENST00000611897 TNXBP22105 4242 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 K7EN84 100 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 OR5A1Q8NGJ0 315 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 TMEM242Q9NWH2 141 aa8.34□□□□□ -1.07
HMGB1P24-201ENST00000611897 IGHV1-58A0A0C4DH39 117 aa8.33□□□□□ -1.08
HMGB1P24-201ENST00000611897 REG3GQ6UW15 175 aa8.33□□□□□ -1.08
HMGB1P24-201ENST00000611897 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 H7C423 109 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 OCC1Q8TAD7 63 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 MRAP2Q96G30 205 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 LINC00474Q9P2X8 69 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
HMGB1P24-201ENST00000611897 I3L3M4 83 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 ZNF561-AS1K7EIQ3 104 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 CEBPGP53567 150 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 SYCNQ0VAF6 134 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 SS18Q15532 418 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
HMGB1P24-201ENST00000611897 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
HMGB1P24-201ENST00000611897 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms