RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
SNX13-213ENST00000611725 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 CFC1P0CG37 223 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 NXPH4O95158 308 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 SIGMAR1Q99720 223 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 GTSF1LQ9H1H1 148 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 CEMP1Q6PRD7 247 aaPredicted RBP4.72□□□□□ -1.65
SNX13-213ENST00000611725 TANC2Q9HCD6 1990 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 C4orf3Q8WVX3 66 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 TACC2O95359 2948 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 A0A0J9YY99 117 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 NPC2P61916 151 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 SH2D6Q7Z4S9 175 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 BBC3Q96PG8 261 aaPredicted RBP4.72□□□□□ -1.65
SNX13-213ENST00000611725 KIF25-AS1Q9Y6Z4 181 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 WFDC2Q14508 124 aa4.72□□□□□ -1.65
SNX13-213ENST00000611725 C9JAW5 83 aa4.71□□□□□ -1.65
SNX13-213ENST00000611725 ZNF22P17026 224 aaPredicted RBP4.71□□□□□ -1.65
SNX13-213ENST00000611725 TSSC4Q9Y5U2 329 aaPredicted RBP4.71□□□□□ -1.65
SNX13-213ENST00000611725 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 CFHR3Q02985 330 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 IGHV3-30-3P0DP02 117 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 ZNF843Q8N446 348 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 CITED2Q99967 270 aaPredicted RBP4.71□□□□□ -1.66
SNX13-213ENST00000611725 P0DMU3 169 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 FAM231AP0DMU4 169 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 FAM231CP0DMU5 169 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 NOP10Q9NPE3 64 aaKnown RBP4.71□□□□□ -1.66
SNX13-213ENST00000611725 LINC00315P59091 139 aa4.71□□□□□ -1.66
SNX13-213ENST00000611725 TRAV8-3A0A0A6YYJ7 113 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 LEPROTO15243 131 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 DNAJC30Q96LL9 226 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 SPTBN5Q9NRC6 3674 aaKnown RBP4.7□□□□□ -1.66
SNX13-213ENST00000611725 IGLV4-3A0A075B6K6 122 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 TNRC18O15417 2968 aaPredicted RBP4.7□□□□□ -1.66
SNX13-213ENST00000611725 SNCGO76070 127 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 HERVK_113P63121 156 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 PPDPFLQ8WWR9 84 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 TRBV10-1A0A0K0K1A3 114 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 ODF3L2Q3SX64 289 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 Q6ZTI0 123 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 OR13C6PQ8NH95 151 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 ZANQ9Y493 2812 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 DNAL4O96015 105 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 CRYBA4P53673 196 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 MUSTN1Q8IVN3 82 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 VSIG2Q96IQ7 327 aa4.7□□□□□ -1.66
SNX13-213ENST00000611725 HTN3P15516 51 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 C18orf65Q6ZTR6 163 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 NDUFA11Q86Y39 141 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 Q9H8V8 135 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 TRBV7-3A0A075B6L6 115 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 TSHBP01222 138 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 PYGO1Q9Y3Y4 419 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 PTPRBP23467 1997 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 IFITM1P13164 125 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 LINC00158P58513 81 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 COL27A1Q8IZC6 1860 aaPredicted RBP4.69□□□□□ -1.66
SNX13-213ENST00000611725 SLC25A20O43772 301 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 PRM2P04554 102 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 PROK1P58294 105 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 C6orf226Q5I0X4 101 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 NFE4Q86UQ8 179 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 CDKN2A-AS1Q9UH64 79 aa4.69□□□□□ -1.66
SNX13-213ENST00000611725 IGHV1-58A0A0C4DH39 117 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 LINC01546A6NGU7 62 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 ATXN8Q156A1 80 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 C2orf82Q6UX34 121 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 NACAE9PAV3 2078 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 A0A1B0GV72 72 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 GAGE6Q13070 117 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 CFAP126Q5VTH2 177 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 LINC01006Q8NI28 216 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 G3V4G9 280 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 Q6ZUT4 128 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 FAM19A4Q96LR4 140 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 PIK3CD-AS1Q5SR53 167 aa4.68□□□□□ -1.66
SNX13-213ENST00000611725 HIST2H2BDQ6DRA6 164 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
SNX13-213ENST00000611725 COL6A5A8TX70 2615 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 K7EQD1 137 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 CRPP02741 224 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 NTN5Q8WTR8 489 aaPredicted RBP4.67□□□□□ -1.66
SNX13-213ENST00000611725 PAX4O43316 350 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 UBE2D1P51668 147 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 HIST2H2BCQ6DN03 193 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 A0A0J9YXY3 114 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 CFAP161Q6P656 301 aa4.67□□□□□ -1.66
SNX13-213ENST00000611725 SPANXB1Q9NS25 103 aaPredicted RBP4.67□□□□□ -1.66
SNX13-213ENST00000611725 PTH2Q96A98 100 aa4.66□□□□□ -1.66
SNX13-213ENST00000611725 DMXL1Q9Y485 3027 aa4.66□□□□□ -1.66
SNX13-213ENST00000611725 IGLV4-69A0A075B6H9 119 aa4.66□□□□□ -1.66
SNX13-213ENST00000611725 TSPAN13O95857 204 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms