RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 A0A0U1RRA0 63 aa8.79□□□□□ -1
TPM3-223ENST00000611659 MIAQ16674 131 aa8.79□□□□□ -1
TPM3-223ENST00000611659 CREBBPQ92793 2442 aa8.79□□□□□ -1
TPM3-223ENST00000611659 H3BT86 120 aa8.78□□□□□ -1
TPM3-223ENST00000611659 TMEM95Q3KNT9 176 aa8.78□□□□□ -1
TPM3-223ENST00000611659 IGHV4-38-2P0DP08 117 aa8.78□□□□□ -1
TPM3-223ENST00000611659 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
TPM3-223ENST00000611659 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
TPM3-223ENST00000611659 IGHG2P01859 326 aa8.78□□□□□ -1
TPM3-223ENST00000611659 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
TPM3-223ENST00000611659 TNFRSF18Q9Y5U5 241 aa8.78□□□□□ -1
TPM3-223ENST00000611659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.77□□□□□ -1.01
TPM3-223ENST00000611659 IGKV2-29A2NJV5 120 aaPredicted RBP8.77□□□□□ -1.01
TPM3-223ENST00000611659 Q9UF83 564 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 CSPG4Q6UVK1 2322 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 LST1O00453 97 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 PRM2P04554 102 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 TMEM61Q8N0U2 210 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
TPM3-223ENST00000611659 VSIG2Q96IQ7 327 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 DUX5Q96PT3 197 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 SPANXDQ9BXN6 97 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 SPANXCQ9NY87 97 aa8.77□□□□□ -1.01
TPM3-223ENST00000611659 IGHV3-38A0A0C4DH36 116 aa8.76□□□□□ -1.01
TPM3-223ENST00000611659 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
TPM3-223ENST00000611659 H3BUA1 57 aa8.75□□□□□ -1.01
TPM3-223ENST00000611659 DOPEY2Q9Y3R5 2298 aa8.75□□□□□ -1.01
TPM3-223ENST00000611659 KLRB1Q12918 225 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 C10orf99Q6UWK7 81 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 YAE1D1Q9NRH1 226 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 PYGO1Q9Y3Y4 419 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 FAM236AA0A1B0GUQ0 79 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 FAM236BA0A1B0GV22 79 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 FAM110AQ9BQ89 295 aa8.74□□□□□ -1.01
TPM3-223ENST00000611659 K7EMT4 169 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 TMEM101Q96IK0 257 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 CRYBG3Q68DQ2 2970 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 TINCRA0A1B0GVN0 87 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 CELSR2Q9HCU4 2923 aa8.73□□□□□ -1.01
TPM3-223ENST00000611659 SYNJ2BPP57105 145 aa8.72□□□□□ -1.01
TPM3-223ENST00000611659 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
TPM3-223ENST00000611659 FAM240AA0A1B0GVK7 77 aa8.72□□□□□ -1.01
TPM3-223ENST00000611659 A6NDX4 124 aa8.72□□□□□ -1.01
TPM3-223ENST00000611659 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
TPM3-223ENST00000611659 ABCA2Q9BZC7 2435 aa8.72□□□□□ -1.01
TPM3-223ENST00000611659 IGHV4-61A0A0C4DH41 118 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 CIRBPQ14011 172 aaKnown RBP8.71□□□□□ -1.01
TPM3-223ENST00000611659 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 UBE2D4Q9Y2X8 147 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 K7EQG2 157 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 BRI3O95415 125 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.01
TPM3-223ENST00000611659 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.01
TPM3-223ENST00000611659 DGAT2L7PQ6IED9 249 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 Q6ZSN1 163 aa8.71□□□□□ -1.01
TPM3-223ENST00000611659 CITED2Q99967 270 aaPredicted RBP8.71□□□□□ -1.01
TPM3-223ENST00000611659 CUBNO60494 3623 aa8.71□□□□□ -1.02
TPM3-223ENST00000611659 CHCHD7Q9BUK0 85 aa8.7□□□□□ -1.02
TPM3-223ENST00000611659 Q9H8V8 135 aa8.7□□□□□ -1.02
TPM3-223ENST00000611659 CENPEQ02224 2701 aa8.7□□□□□ -1.02
TPM3-223ENST00000611659 CSMD2Q7Z408 3487 aa8.7□□□□□ -1.02
TPM3-223ENST00000611659 NACAE9PAV3 2078 aa8.7□□□□□ -1.02
TPM3-223ENST00000611659 UTP20O75691 2785 aaKnown RBP8.7□□□□□ -1.02
TPM3-223ENST00000611659 SPANXA1Q9NS26 97 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 TRBV7-7A0A0K0K1E9 115 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 DEFB121Q5J5C9 76 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 POLQO75417 2590 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
TPM3-223ENST00000611659 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 ITPR1Q14643 2758 aa8.69□□□□□ -1.02
TPM3-223ENST00000611659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.68□□□□□ -1.02
TPM3-223ENST00000611659 COX6A2Q02221 97 aa8.68□□□□□ -1.02
TPM3-223ENST00000611659 Q8N2B8 174 aa8.68□□□□□ -1.02
TPM3-223ENST00000611659 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
TPM3-223ENST00000611659 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
TPM3-223ENST00000611659 SMCR5Q8TEV8 140 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
TPM3-223ENST00000611659 NDUFA1O15239 70 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 COX7A2LO14548 114 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 PSMB8P28062 276 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 DEFB131AP59861 70 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 CFHR3Q02985 330 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 CFAP161Q6P656 301 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 LINC01587Q99440 93 aa8.67□□□□□ -1.02
TPM3-223ENST00000611659 TIMM17BO60830 172 aa8.66□□□□□ -1.02
TPM3-223ENST00000611659 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
TPM3-223ENST00000611659 NDUFA7O95182 113 aa8.66□□□□□ -1.02
TPM3-223ENST00000611659 GNLYP22749 145 aa8.66□□□□□ -1.02
TPM3-223ENST00000611659 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 ACYP1P07311 99 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 FLNCQ14315 2725 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 TMEM126AQ9H061 195 aa8.65□□□□□ -1.02
TPM3-223ENST00000611659 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms