RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
PCDHGB1-202ENST00000611598 PKD1L2Q7Z442 2459 aa11.07□□□□□ -0.64
PCDHGB1-202ENST00000611598 NDUFA12Q9UI09 145 aa11.07□□□□□ -0.64
PCDHGB1-202ENST00000611598 TRBV10-2A0A0K0K1G8 114 aa11.06□□□□□ -0.64
PCDHGB1-202ENST00000611598 ICOSQ9Y6W8 199 aa11.06□□□□□ -0.64
PCDHGB1-202ENST00000611598 PYGO1Q9Y3Y4 419 aa11.06□□□□□ -0.64
PCDHGB1-202ENST00000611598 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 SNCGO76070 127 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 IGHV4-59P01825 116 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 MSMBP08118 114 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 Q6ZSN1 163 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
PCDHGB1-202ENST00000611598 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 GAGE2BQ13066 116 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 H3BMM0 161 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 H7C423 109 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
PCDHGB1-202ENST00000611598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 TRAV8-4A0A0B4J246 113 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 IGKV2-29A2NJV5 120 aaPredicted RBP11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 MIAQ16674 131 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 C2orf82Q6UX34 121 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 DAND5Q8N907 189 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 CCL19Q99731 98 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 USP24Q9UPU5 2620 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 NACAE9PAV3 2078 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
PCDHGB1-202ENST00000611598 GNLYP22749 145 aa11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 NDUFV3P56181 108 aaKnown RBP11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 LINC01600Q96MT4 127 aa11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 CHCHD7Q9BUK0 85 aa11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 B5MCH6 92 aa11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 PRORYQ9H606 182 aa11.02□□□□□ -0.65
PCDHGB1-202ENST00000611598 ATP5J2P56134 94 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 UBE2D4Q9Y2X8 147 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 GAGE5Q13069 117 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 GAGE6Q13070 117 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
PCDHGB1-202ENST00000611598 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
PCDHGB1-202ENST00000611598 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
PCDHGB1-202ENST00000611598 LINC00467Q9BRT7 94 aa11□□□□□ -0.65
PCDHGB1-202ENST00000611598 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
PCDHGB1-202ENST00000611598 ZANQ9Y493 2812 aa11□□□□□ -0.65
PCDHGB1-202ENST00000611598 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
PCDHGB1-202ENST00000611598 CUBNO60494 3623 aa10.99□□□□□ -0.65
PCDHGB1-202ENST00000611598 RBMY1BA6NDE4 496 aaKnown RBP10.99□□□□□ -0.65
PCDHGB1-202ENST00000611598 RBMY1EA6NEQ0 496 aaKnown RBP10.99□□□□□ -0.65
PCDHGB1-202ENST00000611598 RBMY1DP0C7P1 496 aaKnown RBP10.99□□□□□ -0.65
PCDHGB1-202ENST00000611598 DEFB131AP59861 70 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 TTC32Q5I0X7 151 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 DUX3Q96PT4 197 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 EPG5Q9HCE0 2579 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 CCDC179H3BU77 68 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 RNF152Q8N8N0 203 aa10.98□□□□□ -0.65
PCDHGB1-202ENST00000611598 LST1O00453 97 aa10.97□□□□□ -0.65
PCDHGB1-202ENST00000611598 COX6CP09669 75 aa10.97□□□□□ -0.65
PCDHGB1-202ENST00000611598 IFITM1P13164 125 aa10.97□□□□□ -0.65
PCDHGB1-202ENST00000611598 SPANXA1Q9NS26 97 aa10.97□□□□□ -0.65
PCDHGB1-202ENST00000611598 H3BT86 120 aa10.96□□□□□ -0.65
PCDHGB1-202ENST00000611598 DEFB136Q30KP8 78 aa10.96□□□□□ -0.66
PCDHGB1-202ENST00000611598 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
PCDHGB1-202ENST00000611598 TMEM101Q96IK0 257 aa10.95□□□□□ -0.66
PCDHGB1-202ENST00000611598 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
PCDHGB1-202ENST00000611598 A0A0U1RRA0 63 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 B4DSR2 109 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 COX6A2Q02221 97 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 Q6Q795 121 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 NRGNQ92686 78 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 UTP20O75691 2785 aaKnown RBP10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 USP9YO00507 2555 aaPredicted RBP10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 SLURP1P55000 103 aa10.94□□□□□ -0.66
PCDHGB1-202ENST00000611598 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
PCDHGB1-202ENST00000611598 MXRA5Q9NR99 2828 aa10.93□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE12JA6NER3 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 NDUFA1O15239 70 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE7O76087 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 GAGE4Q13068 117 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 IGSF10Q6WRI0 2623 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 FLNCQ14315 2725 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 TMEM89A2RUT3 159 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 TIMM17BO60830 172 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 MAPK1IP1LQ8NDC0 245 aa10.92□□□□□ -0.66
PCDHGB1-202ENST00000611598 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
PCDHGB1-202ENST00000611598 IGHV3OR16-12A0A075B7B8 117 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms