RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 DEFB104AQ8WTQ1 72 aa5.81□□□□□ -1.48
SNCA-212ENST00000611107 D6R8Y8 96 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 IGHV3-30P01768 117 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 IGHV3-33P01772 117 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 IGHV3-30-5P0DP03 117 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 WFDC2Q14508 124 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 IQCJQ1A5X6 159 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 TMEM136Q6ZRR5 245 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 TMEM70Q9BUB7 260 aa5.8□□□□□ -1.48
SNCA-212ENST00000611107 FAT1Q14517 4588 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 TRBV25-1A0A075B6N4 114 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 NPYP01303 97 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 BTF3P20290 206 aaKnown RBP5.79□□□□□ -1.48
SNCA-212ENST00000611107 POLR2KP53803 58 aaKnown RBP5.79□□□□□ -1.48
SNCA-212ENST00000611107 MPV17L2Q567V2 206 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 TMEM97Q5BJF2 176 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 ST20Q9HBF5 79 aa5.79□□□□□ -1.48
SNCA-212ENST00000611107 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 A0A087WTM6 91 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 IGHV1-24A0A0C4DH33 117 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 TRBV27A0A0K0K1C4 114 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 LRCOL1A6NCL2 159 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 K7EP13 123 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 TNFRSF6BO95407 300 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 TSHBP01222 138 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 S100PP25815 95 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 CKS2P33552 79 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 AMTP48728 403 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
SNCA-212ENST00000611107 COTL1Q14019 142 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 ELOBQ15370 118 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 ORMDL3Q8N138 153 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 C10orf126Q8N4M7 172 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.78□□□□□ -1.48
SNCA-212ENST00000611107 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 CHCHD5Q9BSY4 110 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 CHCHD7Q9BUK0 85 aa5.78□□□□□ -1.48
SNCA-212ENST00000611107 TGIF2-C20orf24A0A0A6YYL0 155 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 IBA57-AS1B1ANH7 110 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 I3L3M4 83 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 PPP1R17O96001 155 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 APCSP02743 223 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 PPBPP02775 128 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 KRTAP10-1P60331 282 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 RPL32P62910 135 aaKnown RBP5.77□□□□□ -1.49
SNCA-212ENST00000611107 GAGE6Q13070 117 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 LAGE3Q14657 143 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 CBLN2Q8IUK8 224 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 MAPKAPK5-AS1Q8N8E1 139 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 PRELID3AQ96N28 172 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 SMIM2Q9BVW6 85 aa5.77□□□□□ -1.49
SNCA-212ENST00000611107 A0A087WX48 190 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 PHOX2AO14813 284 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 HLA-DQA1P01909 254 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 ESDP10768 282 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 HAMPP81172 84 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 Q8N976 141 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 C20orf78Q9BR46 151 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 Q9HAA7 133 aa5.76□□□□□ -1.49
SNCA-212ENST00000611107 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
SNCA-212ENST00000611107 TRAV9-2A0A087WT02 112 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
SNCA-212ENST00000611107 PMCHP20382 165 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 PKIAP61925 76 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 RBX1P62877 108 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 KIAA1644Q3SXP7 199 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 C20orf203Q8NBC4 194 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 KLK12Q9UKR0 248 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 LAMTOR2Q9Y2Q5 125 aa5.75□□□□□ -1.49
SNCA-212ENST00000611107 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 TMEM262E9PQX1 116 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 VCYO14598 125 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 UBE2L6O14933 153 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 CDK2AP2O75956 126 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 MT-ND6P03923 174 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 XGP55808 180 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 COX19Q49B96 90 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 CLPSL2Q6UWE3 100 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 KIR2DL4Q99706 377 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
SNCA-212ENST00000611107 VPS13BQ7Z7G8 4022 aa5.74□□□□□ -1.49
SNCA-212ENST00000611107 A0A1B0GUV1 79 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 LECT2O14960 151 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 ANGP03950 147 aaKnown RBP5.73□□□□□ -1.49
SNCA-212ENST00000611107 FGF6P10767 208 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 ENHOQ6UWT2 76 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 NFE4Q86UQ8 179 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 MAP1LC3AQ9H492 121 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 SMCO4Q9NRQ5 59 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 PRR34Q9NV39 138 aa5.73□□□□□ -1.49
SNCA-212ENST00000611107 H7C423 109 aa5.72□□□□□ -1.49
SNCA-212ENST00000611107 TCAPO15273 167 aa5.72□□□□□ -1.49
SNCA-212ENST00000611107 FCER1GP30273 86 aa5.72□□□□□ -1.49
SNCA-212ENST00000611107 MRPL52Q86TS9 123 aaKnown RBP5.72□□□□□ -1.49
SNCA-212ENST00000611107 LINC00269Q8N2A0 174 aa5.72□□□□□ -1.49
SNCA-212ENST00000611107 UBE2WQ96B02 151 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms