RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 RHOHQ15669 191 aa14.12□□□□□ -0.15
SEMA3B-210ENST00000611067 ATXN8Q156A1 80 aa14.12□□□□□ -0.15
SEMA3B-210ENST00000611067 IGKV3-7A0A075B6H7 116 aa14.12□□□□□ -0.15
SEMA3B-210ENST00000611067 A0A0J9YX75 114 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 IGHV3-11P01762 117 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 Q8N1Y9 231 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 ZNF256Q9Y2P7 627 aaPredicted RBP14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 MXRA5Q9NR99 2828 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 H7C2G1 150 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 SNCGO76070 127 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 NHLRC4P0CG21 123 aaPredicted RBP14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 ZNF22P17026 224 aaPredicted RBP14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 GAGE2BQ13066 116 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 LINC01620Q4KN68 170 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
SEMA3B-210ENST00000611067 DUX5Q96PT3 197 aa14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 OPRPNQ99935 248 aaPredicted RBP14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 RHPN1-AS1Q9BWJ2 59 aa14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 YAE1D1Q9NRH1 226 aa14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 M0R2P5 195 aa14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 MDFICQ9P1T7 246 aa14.1□□□□□ -0.15
SEMA3B-210ENST00000611067 SONP18583 2426 aaKnown RBP14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 RPL13AP40429 203 aaKnown RBP14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 KRTAP1-1Q07627 177 aa14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 Q1RN00 199 aa14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 FAM74A4Q5TZK3 123 aa14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 ZNF702PQ9H963 129 aa14.09□□□□□ -0.15
SEMA3B-210ENST00000611067 M0QY20 66 aa14.08□□□□□ -0.15
SEMA3B-210ENST00000611067 ELANEP08246 267 aa14.08□□□□□ -0.15
SEMA3B-210ENST00000611067 PSMB8P28062 276 aa14.08□□□□□ -0.15
SEMA3B-210ENST00000611067 SS18L2Q9UHA2 77 aa14.08□□□□□ -0.15
SEMA3B-210ENST00000611067 TRBV30A0A0K0K1B3 111 aa14.08□□□□□ -0.16
SEMA3B-210ENST00000611067 TMEM86BQ8N661 226 aa14.08□□□□□ -0.16
SEMA3B-210ENST00000611067 C9orf85Q96MD7 179 aa14.08□□□□□ -0.16
SEMA3B-210ENST00000611067 TRAV4A0A0B4J268 109 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 Q6Q795 121 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 IGHV3-64A0A075B6Q5 118 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 TRAV12-3A0A0B4J271 114 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 TRBV10-2A0A0K0K1G8 114 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 NDUFV3P56181 108 aaKnown RBP14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 ZNF56Q15929 161 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 C20orf203Q8NBC4 194 aa14.07□□□□□ -0.16
SEMA3B-210ENST00000611067 A0A0J9YXY3 114 aa14.06□□□□□ -0.16
SEMA3B-210ENST00000611067 CRLF1O75462 422 aa14.06□□□□□ -0.16
SEMA3B-210ENST00000611067 ACANP16112 2415 aa14.05□□□□□ -0.16
SEMA3B-210ENST00000611067 IGHV3-16A0A0C4DH30 117 aa14.05□□□□□ -0.16
SEMA3B-210ENST00000611067 ID1P41134 155 aa14.05□□□□□ -0.16
SEMA3B-210ENST00000611067 DAZ1Q9NQZ3 744 aaKnown RBP14.05□□□□□ -0.16
SEMA3B-210ENST00000611067 TRAV8-4A0A0B4J246 113 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 A0A0J9YXV3 536 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 B5MCH6 92 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 C10orf99Q6UWK7 81 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 IGLV4-3A0A075B6K6 122 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 TEX49A0A1B0GTD5 131 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 TRIAP1O43715 76 aa14.04□□□□□ -0.16
SEMA3B-210ENST00000611067 ODF3Q96PU9 254 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 MYO9AB2RTY4 2548 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 I3L3M4 83 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 IFITM1P13164 125 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 TTC32Q5I0X7 151 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 DCANP1Q8TF63 244 aa14.03□□□□□ -0.16
SEMA3B-210ENST00000611067 DNAJC9-AS1A6NH13 148 aa14.02□□□□□ -0.16
SEMA3B-210ENST00000611067 H3BMM0 161 aa14.02□□□□□ -0.16
SEMA3B-210ENST00000611067 Q8N2B8 174 aa14.02□□□□□ -0.16
SEMA3B-210ENST00000611067 UBE2WQ96B02 151 aa14.02□□□□□ -0.16
SEMA3B-210ENST00000611067 LITAFQ99732 161 aa14.02□□□□□ -0.16
SEMA3B-210ENST00000611067 IGHV3-30-3P0DP02 117 aa14.02□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE12JA6NER3 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE7O76087 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE12FP0CL80 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE12GP0CL81 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE12IP0CL82 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 GAGE4Q13068 117 aa14.01□□□□□ -0.17
SEMA3B-210ENST00000611067 AKAP9Q99996 3911 aa14□□□□□ -0.17
SEMA3B-210ENST00000611067 NOTCH2Q04721 2471 aa14□□□□□ -0.17
SEMA3B-210ENST00000611067 C15orf53Q8NAA6 179 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 SPXQ9BT56 116 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 TIMM21Q9BVV7 248 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 ICOSQ9Y6W8 199 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 K7EMT4 169 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 C2orf82Q6UX34 121 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 SPANXDQ9BXN6 97 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 SPANXCQ9NY87 97 aa13.99□□□□□ -0.17
SEMA3B-210ENST00000611067 PYGO1Q9Y3Y4 419 aa13.98□□□□□ -0.17
SEMA3B-210ENST00000611067 H3BT86 120 aa13.98□□□□□ -0.17
SEMA3B-210ENST00000611067 EDN2P20800 178 aa13.98□□□□□ -0.17
SEMA3B-210ENST00000611067 MRPS36P82909 103 aaKnown RBP13.98□□□□□ -0.17
SEMA3B-210ENST00000611067 H7C423 109 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 UBE2E2Q96LR5 201 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 TRAV12-2A0A075B6T6 113 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 IGHV1OR15-1A0A075B7D0 117 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 ADARB2-AS1A8MUL3 147 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 PRSS2P07478 247 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 COX6CP09669 75 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 RNF152Q8N8N0 203 aa13.97□□□□□ -0.17
SEMA3B-210ENST00000611067 CCDC179H3BU77 68 aa13.96□□□□□ -0.17
SEMA3B-210ENST00000611067 MRPL23Q16540 153 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms