RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 RPS28P62857 69 aaKnown RBP6.98□□□□□ -1.29
COL25A1-208ENST00000610288 BLCAPP62952 87 aa6.98□□□□□ -1.29
COL25A1-208ENST00000610288 DEFB136Q30KP8 78 aa6.98□□□□□ -1.29
COL25A1-208ENST00000610288 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
COL25A1-208ENST00000610288 SND1-IT1Q9HBX3 110 aa6.98□□□□□ -1.29
COL25A1-208ENST00000610288 C2CD3Q4AC94 2353 aa6.98□□□□□ -1.29
COL25A1-208ENST00000610288 PRR14LQ5THK1 2151 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 IGHV4-38-2P0DP08 117 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 IGHV4-30-2A0A087WSY4 118 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 A0A0J9YY99 117 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 APOC4P55056 127 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 MSMPQ1L6U9 139 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 Q8N9W7 124 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 AJUBAQ96IF1 538 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 HCFC1P51610 2035 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 A0A096LPF7 62 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 FUSP35637 526 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL25A1-208ENST00000610288 UPK3BQ9BT76 320 aa6.97□□□□□ -1.29
COL25A1-208ENST00000610288 WISP2O76076 250 aa6.96□□□□□ -1.29
COL25A1-208ENST00000610288 C1orf229Q6ZS94 237 aaPredicted RBP6.96□□□□□ -1.29
COL25A1-208ENST00000610288 CRIP1P50238 77 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 DAZ2Q13117 558 aaKnown RBP6.96□□□□□ -1.3
COL25A1-208ENST00000610288 MIAQ16674 131 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 DAZ4Q86SG3 579 aaKnown RBP6.96□□□□□ -1.3
COL25A1-208ENST00000610288 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 DAZ3Q9NR90 486 aaKnown RBP6.96□□□□□ -1.3
COL25A1-208ENST00000610288 PDE6GP18545 87 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 DEFB113Q30KQ7 82 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 DAND5Q8N907 189 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 PCDH15Q96QU1 1955 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 LOC107984640A0A0U1RRK4 108 aa6.96□□□□□ -1.3
COL25A1-208ENST00000610288 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
COL25A1-208ENST00000610288 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
COL25A1-208ENST00000610288 ADORA2A-AS1P86434 159 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 CDIP1Q9H305 208 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 MDFICQ9P1T7 246 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 CCL24O00175 119 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 MP68P56378 58 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 TRBV7-3A0A075B6L6 115 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 IGLV2-11P01706 119 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 DAZAP2Q15038 168 aaPredicted RBP6.95□□□□□ -1.3
COL25A1-208ENST00000610288 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
COL25A1-208ENST00000610288 SLURP1P55000 103 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 C14orf132Q9NPU4 83 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 FN1P02751 2386 aaKnown RBP6.94□□□□□ -1.3
COL25A1-208ENST00000610288 TRIAP1O43715 76 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 APRG1Q8IVJ8 170 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 PRORYQ9H606 182 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 MTORP42345 2549 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 CDK2AP2O75956 126 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 NKAPP1Q8N9T2 125 aa6.94□□□□□ -1.3
COL25A1-208ENST00000610288 C5orf56Q8N8D9 126 aa6.93□□□□□ -1.3
COL25A1-208ENST00000610288 K7EMT4 169 aa6.93□□□□□ -1.3
COL25A1-208ENST00000610288 LECT2O14960 151 aa6.93□□□□□ -1.3
COL25A1-208ENST00000610288 Q6ZQT7 251 aa6.93□□□□□ -1.3
COL25A1-208ENST00000610288 TMEM256-PLSCR3K7ERE1 68 aa6.93□□□□□ -1.3
COL25A1-208ENST00000610288 ZFP36P26651 326 aaKnown RBP6.93□□□□□ -1.3
COL25A1-208ENST00000610288 ATG2AQ2TAZ0 1938 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 KIAA1549Q9HCM3 1950 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 Q6JHZ5 121 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 C2orf16Q68DN1 1984 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 SRCAPQ6ZRS2 3230 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 XCL1P47992 114 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 NUP210LQ5VU65 1888 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
COL25A1-208ENST00000610288 OPRPNQ99935 248 aaPredicted RBP6.92□□□□□ -1.3
COL25A1-208ENST00000610288 PRRC2AP48634 2157 aaKnown RBP6.91□□□□□ -1.3
COL25A1-208ENST00000610288 LST1O00453 97 aa6.91□□□□□ -1.3
COL25A1-208ENST00000610288 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
COL25A1-208ENST00000610288 EP400Q96L91 3159 aa6.91□□□□□ -1.3
COL25A1-208ENST00000610288 ZNF22P17026 224 aaPredicted RBP6.91□□□□□ -1.3
COL25A1-208ENST00000610288 TMEM223A0PJW6 202 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 UBE2D3P61077 147 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 UBE2D2P62837 147 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 C5orf38Q86SI9 138 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 HIST2H2BCQ6DN03 193 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 HIST2H2BDQ6DRA6 164 aa6.9□□□□□ -1.3
COL25A1-208ENST00000610288 NREPQ16612 68 aa6.9□□□□□ -1.31
COL25A1-208ENST00000610288 TNRC6BQ9UPQ9 1833 aaKnown RBP6.89□□□□□ -1.31
COL25A1-208ENST00000610288 IGHV4OR15-8A0A075B7B6 117 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 A0A087WW49 117 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 NRACQ8N912 160 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 Q8NA96 180 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 HHLA3Q9XRX5 114 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 FBXL19-AS1Q494R0 122 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 DEFB1P60022 68 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 ENHOQ6UWT2 76 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 CNFNQ9BYD5 112 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 K7EQD1 137 aa6.89□□□□□ -1.31
COL25A1-208ENST00000610288 KLK5Q9Y337 293 aaPredicted RBP6.89□□□□□ -1.31
COL25A1-208ENST00000610288 MIR7-3HGQ8N6C7 128 aa6.88□□□□□ -1.31
COL25A1-208ENST00000610288 RMI2Q96E14 147 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms