RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
SMCHD1-213ENST00000609587 ARHGAP32A7KAX9 2087 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 NUMA1Q14980 2115 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 KIAA2026Q5HYC2 2103 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 KIAA0100Q14667 2235 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 TRAV10A0A0B4J240 114 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 F2Z2F3 143 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 H3BUT2 72 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 SIX6O95475 246 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 IGHV3-33P01772 117 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 GNG11P61952 73 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 NDUFA11Q86Y39 141 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 BPESC1Q9GZL8 116 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 NXT2Q9NPJ8 142 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 PRXQ9BXM0 1461 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 ABCA6Q8N139 1617 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 COL5A3P25940 1745 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 RGPD8O14715 1765 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 RGPD5Q99666 1765 aa1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 MAP2P11137 1827 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-213ENST00000609587 HEATR5BQ9P2D3 2071 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 PLXNA1Q9UIW2 1896 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 TRAV22A0A0B4J277 110 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 A0A0J9YX75 114 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 C7orf77A4D0Y5 90 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 ERC2-IT1O76042 136 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 SNRPFP62306 86 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 CNBPP62633 177 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 PDE6HQ13956 83 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 Q9BRP9 147 aa1.78□□□□□ -2.12
SMCHD1-213ENST00000609587 MPDZO75970 2070 aa1.78□□□□□ -2.13
SMCHD1-213ENST00000609587 EXPH5Q8NEV8 1989 aa1.78□□□□□ -2.13
SMCHD1-213ENST00000609587 ITSN2Q9NZM3 1697 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 HMGXB3Q12766 1538 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 URB2Q14146 1524 aaKnown RBP1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 NEXMIFQ5QGS0 1516 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 TRBV7-3A0A075B6L6 115 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 TMSB15BA0A087X1C1 80 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 CLPSL1A2RUU4 121 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 CRYM-AS1A6NIL9 109 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 C2orf70A6NJV1 201 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 C10orf142B7Z368 130 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 PMCHL1Q16048 86 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 CYP2G1PQ6ZSU1 146 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 FAM223AQ8IWN6 122 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 TMEM254Q8TBM7 123 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 MYOFQ9NZM1 2061 aa1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 ZNF142P52746 1687 aaPredicted RBP1.77□□□□□ -2.13
SMCHD1-213ENST00000609587 PLXNC1O60486 1568 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 SLIT2O94813 1529 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 NINQ8N4C6 2090 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 TRGV4A0A0C4DH28 118 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 KANTRA0A1W2PQU2 76 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 UBE2D1P51668 147 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 ELOBQ15370 118 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 DEFB121Q5J5C9 76 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 ZNF818PQ6ZRF7 136 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 LINC00643Q86TS7 51 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 TIMM21Q9BVV7 248 aa1.76□□□□□ -2.13
SMCHD1-213ENST00000609587 MYOM1P52179 1685 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 CR1P17927 2039 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 LOC101927531A0A1B0GV80 90 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 ACYP1P07311 99 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 XAF1Q6GPH4 301 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 Q8N6K4 173 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 SPTSSBQ8NFR3 76 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 CDC42SE2Q9NRR3 84 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 PRO1854Q9UHT4 67 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 RNF17Q9BXT8 1623 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 GLI2P10070 1586 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 ARHGEF5Q12774 1597 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 TOP2AP11388 1531 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 ASXL1Q8IXJ9 1541 aa1.75□□□□□ -2.13
SMCHD1-213ENST00000609587 MICAL3Q7RTP6 2002 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 BAZ2BQ9UIF8 2168 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 A0A087WXM4 84 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 A0A0G2JND7 137 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 TEX49A0A1B0GTD5 131 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 C1orf137Q5JT78 98 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 CSAG1Q6PB30 78 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 C2orf82Q6UX34 121 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 IFI27L1Q96BM0 104 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 CCL26Q9Y258 94 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 COL11A1P12107 1806 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 FCGBPQ9Y6R7 5405 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 CD163L1Q9NR16 1453 aa1.74□□□□□ -2.13
SMCHD1-213ENST00000609587 TOP2BQ02880 1626 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 A0A1B0GUL6 1792 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 CLASP1Q7Z460 1538 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 PRRC2BQ5JSZ5 2229 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 TRBV25-1A0A075B6N4 114 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 TRAV23DV6A0A075B6W5 121 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 A0A0J9YY99 117 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 NUPR2A6NF83 97 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 A6NIN4 97 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 PRB4P10163 310 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 ERHP84090 104 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms