RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 MSMBP08118 114 aa16.35■□□□□ 0.21
SHANK2-220ENST00000608988 UBE2D4Q9Y2X8 147 aa16.35■□□□□ 0.21
SHANK2-220ENST00000608988 ADARB2-AS1A8MUL3 147 aa16.35■□□□□ 0.21
SHANK2-220ENST00000608988 CHCHD7Q9BUK0 85 aa16.35■□□□□ 0.21
SHANK2-220ENST00000608988 TIRAPP58753 221 aa16.34■□□□□ 0.21
SHANK2-220ENST00000608988 NDUFA1O15239 70 aa16.33■□□□□ 0.21
SHANK2-220ENST00000608988 COPS9Q8WXC6 57 aa16.33■□□□□ 0.21
SHANK2-220ENST00000608988 IGLV5-45A0A087WSX0 123 aa16.33■□□□□ 0.2
SHANK2-220ENST00000608988 ZNF415Q09FC8 603 aa16.31■□□□□ 0.2
SHANK2-220ENST00000608988 CIRBPQ14011 172 aaKnown RBP16.31■□□□□ 0.2
SHANK2-220ENST00000608988 MED13LQ71F56 2210 aa16.31■□□□□ 0.2
SHANK2-220ENST00000608988 B5MCH6 92 aa16.31■□□□□ 0.2
SHANK2-220ENST00000608988 SS18L2Q9UHA2 77 aa16.31■□□□□ 0.2
SHANK2-220ENST00000608988 ABCA2Q9BZC7 2435 aa16.3■□□□□ 0.2
SHANK2-220ENST00000608988 ACYP1P07311 99 aa16.3■□□□□ 0.2
SHANK2-220ENST00000608988 LINC00467Q9BRT7 94 aa16.3■□□□□ 0.2
SHANK2-220ENST00000608988 PRORYQ9H606 182 aa16.3■□□□□ 0.2
SHANK2-220ENST00000608988 C19orf84I3L1E1 186 aa16.29■□□□□ 0.2
SHANK2-220ENST00000608988 CCL19Q99731 98 aa16.29■□□□□ 0.2
SHANK2-220ENST00000608988 RBMY1A1P0DJD3 496 aaKnown RBP16.28■□□□□ 0.2
SHANK2-220ENST00000608988 RBMY1CP0DJD4 496 aa16.28■□□□□ 0.2
SHANK2-220ENST00000608988 RBMY1FQ15415 496 aaKnown RBP16.28■□□□□ 0.2
SHANK2-220ENST00000608988 TMEM95Q3KNT9 176 aa16.28■□□□□ 0.2
SHANK2-220ENST00000608988 CEMP1Q6PRD7 247 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-220ENST00000608988 TRBV7-7A0A0K0K1E9 115 aa16.27■□□□□ 0.2
SHANK2-220ENST00000608988 SYNJ2BPP57105 145 aa16.27■□□□□ 0.2
SHANK2-220ENST00000608988 B4DSR2 109 aa16.27■□□□□ 0.19
SHANK2-220ENST00000608988 CLEC2BQ92478 149 aa16.27■□□□□ 0.19
SHANK2-220ENST00000608988 PPDPFQ9H3Y8 114 aa16.27■□□□□ 0.19
SHANK2-220ENST00000608988 IGHV3-53P01767 116 aa16.26■□□□□ 0.19
SHANK2-220ENST00000608988 IGHV3-73A0A0B4J1V6 119 aa16.25■□□□□ 0.19
SHANK2-220ENST00000608988 DUX3Q96PT4 197 aa16.25■□□□□ 0.19
SHANK2-220ENST00000608988 PRRC2AP48634 2157 aaKnown RBP16.25■□□□□ 0.19
SHANK2-220ENST00000608988 CSMD1Q96PZ7 3565 aa16.25■□□□□ 0.19
SHANK2-220ENST00000608988 PROK1P58294 105 aa16.25■□□□□ 0.19
SHANK2-220ENST00000608988 FAM19A3Q7Z5A8 133 aa16.25■□□□□ 0.19
SHANK2-220ENST00000608988 UBE2E2Q96LR5 201 aa16.24■□□□□ 0.19
SHANK2-220ENST00000608988 IMUPQ9GZP8 106 aa16.24■□□□□ 0.19
SHANK2-220ENST00000608988 SPTA1P02549 2419 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 IGHV4-30-2A0A087WSY4 118 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 IGLV5-39A0A0G2JS06 123 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 CCDC179H3BU77 68 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 HERVK_113P63121 156 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 BEAN1Q3B7T3 259 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 RNASE13Q5GAN3 156 aaKnown RBP16.23■□□□□ 0.19
SHANK2-220ENST00000608988 TMEM101Q96IK0 257 aa16.23■□□□□ 0.19
SHANK2-220ENST00000608988 HOXD3P31249 432 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-220ENST00000608988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-220ENST00000608988 IGKV2-29A2NJV5 120 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-220ENST00000608988 COX7A2LO14548 114 aa16.22■□□□□ 0.19
SHANK2-220ENST00000608988 ATP5J2P56134 94 aa16.22■□□□□ 0.19
SHANK2-220ENST00000608988 CDKN2A-AS1Q9UH64 79 aa16.22■□□□□ 0.19
SHANK2-220ENST00000608988 LINC00308Q8TCZ7 52 aa16.21■□□□□ 0.19
SHANK2-220ENST00000608988 DUX5Q96PT3 197 aa16.21■□□□□ 0.19
SHANK2-220ENST00000608988 ITPR1Q14643 2758 aa16.21■□□□□ 0.18
SHANK2-220ENST00000608988 KNCNA6PVL3 124 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 RS1O15537 224 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 IGHV4-59P01825 116 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 CITED2Q99967 270 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-220ENST00000608988 SPTBN1Q01082 2364 aaKnown RBP16.2■□□□□ 0.18
SHANK2-220ENST00000608988 A8MZ25 164 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 DSCR9P59020 149 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 NPC2P61916 151 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 Q6ZSN1 163 aa16.2■□□□□ 0.18
SHANK2-220ENST00000608988 AVPP01185 164 aa16.19■□□□□ 0.18
SHANK2-220ENST00000608988 DEFB112Q30KQ8 113 aa16.19■□□□□ 0.18
SHANK2-220ENST00000608988 C10orf99Q6UWK7 81 aa16.19■□□□□ 0.18
SHANK2-220ENST00000608988 Q6ZSV7 163 aa16.19■□□□□ 0.18
SHANK2-220ENST00000608988 DEFB131AP59861 70 aa16.18■□□□□ 0.18
SHANK2-220ENST00000608988 DGAT2L7PQ6IED9 249 aa16.18■□□□□ 0.18
SHANK2-220ENST00000608988 SHISA2Q6UWI4 295 aa16.18■□□□□ 0.18
SHANK2-220ENST00000608988 PKD1L2Q7Z442 2459 aa16.17■□□□□ 0.18
SHANK2-220ENST00000608988 TRACP01848 142 aa16.17■□□□□ 0.18
SHANK2-220ENST00000608988 HTN1P15515 57 aa16.17■□□□□ 0.18
SHANK2-220ENST00000608988 C11orf72Q8NBR9 251 aa16.17■□□□□ 0.18
SHANK2-220ENST00000608988 J3QLI3 93 aa16.16■□□□□ 0.18
SHANK2-220ENST00000608988 CSDC2Q9Y534 153 aaKnown RBP16.16■□□□□ 0.18
SHANK2-220ENST00000608988 RBMY1BA6NDE4 496 aaKnown RBP16.16■□□□□ 0.18
SHANK2-220ENST00000608988 RBMY1EA6NEQ0 496 aaKnown RBP16.16■□□□□ 0.18
SHANK2-220ENST00000608988 RBMY1DP0C7P1 496 aaKnown RBP16.16■□□□□ 0.18
SHANK2-220ENST00000608988 ACACBO00763 2458 aa16.15■□□□□ 0.18
SHANK2-220ENST00000608988 Q9H8V8 135 aa16.15■□□□□ 0.18
SHANK2-220ENST00000608988 ATRXP46100 2492 aa16.15■□□□□ 0.18
SHANK2-220ENST00000608988 HERV-K104P63124 156 aa16.14■□□□□ 0.17
SHANK2-220ENST00000608988 IGHV3OR16-12A0A075B7B8 117 aa16.13■□□□□ 0.17
SHANK2-220ENST00000608988 INSP01308 110 aa16.13■□□□□ 0.17
SHANK2-220ENST00000608988 Q9UF83 564 aa16.13■□□□□ 0.17
SHANK2-220ENST00000608988 GNLYP22749 145 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 LINC00242Q5T6M2 205 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 FAM222AQ5U5X8 452 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 LINC01587Q99440 93 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 VPREB3Q9UKI3 123 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 DOPEY2Q9Y3R5 2298 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 LINC00643Q86TS7 51 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 DAND5Q8N907 189 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 LINC01356Q8N9X3 169 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 FAM110AQ9BQ89 295 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 PEMTQ9UBM1 199 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 NACAE9PAV3 2078 aa16.12■□□□□ 0.17
SHANK2-220ENST00000608988 LY6DQ14210 128 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms