RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 SPTSSAQ969W0 71 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 PSMG3Q9BT73 122 aaPredicted RBP-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 MRC1P22897 1456 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 PXDNQ92626 1479 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 IFT140Q96RY7 1462 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 DSTQ03001 7570 aaKnown RBP-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 BICRAQ9NZM4 1560 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 PTPN13Q12923 2485 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 MYOM3Q5VTT5 1437 aa-0.38□□□□□ -2.47
SNORA28-201ENST00000606769 KDM3BQ7LBC6 1761 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 ZNF518AQ6AHZ1 1483 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 A0A0D9SFI3 127 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 HCG22E2RYF7 251 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 PIN1P1O15428 100 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 SIX6O95475 246 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 RPL7L1Q6DKI1 246 aaKnown RBP-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 LINC00472Q9H8W2 130 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 SCN3BQ9NY72 215 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 FAT2Q9NYQ8 4349 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 PKDREJQ9NTG1 2253 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 ZNF609O15014 1411 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 DOCK1Q14185 1865 aa-0.39□□□□□ -2.47
SNORA28-201ENST00000606769 FAM92AA1XBS5 289 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 J3QR89 54 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 PIPP12273 146 aaPredicted RBP-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 GUCA1AP43080 201 aaPredicted RBP-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 SPAG11BQ08648 103 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 Q8N8P6 123 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 MAFIPQ8WZ33 124 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 SEC11CQ9BY50 192 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 TPT1P8Q9HAU6 139 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 COPZ2Q9P299 210 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 MYH9P35579 1960 aaKnown RBP-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 DOPEY2Q9Y3R5 2298 aa-0.4□□□□□ -2.47
SNORA28-201ENST00000606769 GRIN2AQ12879 1464 aa-0.41□□□□□ -2.47
SNORA28-201ENST00000606769 BCL9LQ86UU0 1499 aa-0.41□□□□□ -2.47
SNORA28-201ENST00000606769 TRAV22A0A0B4J277 110 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 A6NIN4 97 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 M0R135 149 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 SNCGO76070 127 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 PPP1R17O96001 155 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 HIST1H1DP16402 221 aaKnown RBP-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 COPZ1P61923 177 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 Q8IZM0 81 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 AMELXQ99217 191 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 TMEM191AQ9H0A3 160 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 HECTD4Q9Y4D8 3996 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 PLCE1Q9P212 2302 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 C10orf71Q711Q0 1435 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 WNK3Q9BYP7 1800 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 USF3Q68DE3 2245 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 ARAP2Q8WZ64 1704 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 NWD2Q9ULI1 1742 aa-0.41□□□□□ -2.48
SNORA28-201ENST00000606769 PATJQ8NI35 1801 aa-0.42□□□□□ -2.48
SNORA28-201ENST00000606769 RBM3P98179 157 aaKnown RBP-0.42□□□□□ -2.48
SNORA28-201ENST00000606769 KCNRGQ8N5I3 272 aa-0.42□□□□□ -2.48
SNORA28-201ENST00000606769 LZICQ8WZA0 190 aa-0.42□□□□□ -2.48
SNORA28-201ENST00000606769 PHLPP1O60346 1717 aa-0.42□□□□□ -2.48
SNORA28-201ENST00000606769 GVINP1Q7Z2Y8 2422 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 SPEF2Q9C093 1822 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 FLNAP21333 2647 aaKnown RBP-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 UNC13AQ9UPW8 1703 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 ZANQ9Y493 2812 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 TRAV13-2A0A0B4J235 113 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 TP53AIP1Q9HCN2 124 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 NPVFQ9HCQ7 196 aa-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 SRRM2Q9UQ35 2752 aaKnown RBP-0.43□□□□□ -2.48
SNORA28-201ENST00000606769 BSNQ9UPA5 3926 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 PAPPAQ13219 1627 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 SMCO1Q147U7 214 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 C10orf128Q5T292 105 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 TSLPQ969D9 159 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 NDUFA4L2Q9NRX3 87 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 LENEPQ9Y5L5 61 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 SPCS1Q9Y6A9 102 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 R4GMQ9 66 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 FOCADQ5VW36 1801 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 SPTBN1Q01082 2364 aaKnown RBP-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 CFTRP13569 1480 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 MBD5Q9P267 1494 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 TENM2Q9NT68 2774 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 RIMS1Q86UR5 1692 aaKnown RBP-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 LRRC37A2A6NM11 1700 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 DCHS2Q6V1P9 2916 aa-0.44□□□□□ -2.48
SNORA28-201ENST00000606769 ERCC6L2Q5T890 1561 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 COL6A3P12111 3177 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 PPIP5K1Q6PFW1 1433 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 KIF21AQ7Z4S6 1674 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 CSPG4Q6UVK1 2322 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 CTXND1A0A1B0GTU2 59 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 LOC100130705A0A1B0GUX0 176 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 NDUFA2O43678 99 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 SPRR2BP35325 72 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 KRTAP19-7Q3SYF9 63 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 Q6AWC8 147 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 SPAG11AQ6PDA7 123 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 TTC9CQ8N5M4 171 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 TCEAL4Q96EI5 215 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 PDCD10Q9BUL8 212 aa-0.45□□□□□ -2.48
SNORA28-201ENST00000606769 MUC12Q9UKN1 5478 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms