RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 AMTP48728 403 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 TIRAPP58753 221 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 COTL1Q14019 142 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 IQCJQ1A5X6 159 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 LELP1Q5T871 98 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 LGALS9CQ6DKI2 356 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 DNAH2Q9P225 4427 aa5.26□□□□□ -1.57
MSH6-211ENST00000606499 RYR2Q92736 4967 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 IGLV2-18A0A075B6J9 118 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 TRBV25-1A0A075B6N4 114 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 IGHV1-24A0A0C4DH33 117 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 VCYO14598 125 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 TCAPO15273 167 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 FCER1GP30273 86 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 IFI27P40305 119 aaPredicted RBP5.25□□□□□ -1.57
MSH6-211ENST00000606499 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
MSH6-211ENST00000606499 Q8N3U1 123 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 C18orf32Q8TCD1 76 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 UPK3BQ9BT76 320 aa5.25□□□□□ -1.57
MSH6-211ENST00000606499 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.24□□□□□ -1.57
MSH6-211ENST00000606499 TRAV8-6A0A0B4J262 113 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 IGKV2-29A2NJV5 120 aaPredicted RBP5.24□□□□□ -1.57
MSH6-211ENST00000606499 PRSS47A8MTI9 375 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 TMEM97Q5BJF2 176 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 Q8N8P6 123 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 KIR2DL4Q99706 377 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 CHCHD5Q9BSY4 110 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 TMEM243Q9BU79 118 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 CHCHD7Q9BUK0 85 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 RYR3Q15413 4870 aa5.24□□□□□ -1.57
MSH6-211ENST00000606499 KMT2AQ03164 3969 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 LCE6AA0A183 80 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 SIVA1O15304 175 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 IGHV3-30P01768 117 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 IGHV3-33P01772 117 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 IGHV3-30-3P0DP02 117 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 IGHV3-30-5P0DP03 117 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 ESDP10768 282 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 GAGE6Q13070 117 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 MPV17L2Q567V2 206 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 NIT1Q86X76 327 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 PRSS3P2Q8NHM4 247 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 Q9H8V8 135 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 NXT2Q9NPJ8 142 aaKnown RBP5.23□□□□□ -1.57
MSH6-211ENST00000606499 DNAH10Q8IVF4 4471 aa5.23□□□□□ -1.57
MSH6-211ENST00000606499 DNAH10OSP0CZ25 163 aa5.22□□□□□ -1.57
MSH6-211ENST00000606499 RPL39P62891 51 aaKnown RBP5.22□□□□□ -1.57
MSH6-211ENST00000606499 Q8N976 141 aa5.22□□□□□ -1.57
MSH6-211ENST00000606499 KRTAP1-5Q9BYS1 174 aa5.22□□□□□ -1.57
MSH6-211ENST00000606499 FRAS1Q86XX4 4008 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 A0A087WX48 190 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 TMEM262E9PQX1 116 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 M0R2N4 97 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 UBE2L6O14933 153 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 RBX1P62877 108 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 LAGE3Q14657 143 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 LINC01556Q5JQF7 62 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 RNASEKQ6P5S7 137 aaKnown RBP5.21□□□□□ -1.58
MSH6-211ENST00000606499 FA2HQ7L5A8 372 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 C20orf203Q8NBC4 194 aa5.21□□□□□ -1.58
MSH6-211ENST00000606499 IGLV4-60A0A075B6I1 120 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 NBDYA0A0U1RRE5 68 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 LINC01546A6NGU7 62 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 A6NJY4 79 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 K7EMI3 77 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BKO60814 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BJP06899 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 LINC00614P0C842 121 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 FGF6P10767 208 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BOP23527 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BBP33778 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BDP58876 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 LINC00310P59036 64 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BCP62807 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 PMCHL1Q16048 86 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST2H2BEQ16778 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 ORMDL2Q53FV1 153 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.2□□□□□ -1.58
MSH6-211ENST00000606499 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BHQ93079 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BNQ99877 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 HIST1H2BMQ99879 126 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 AP5S1Q9NUS5 200 aa5.2□□□□□ -1.58
MSH6-211ENST00000606499 A0A096LNJ9 63 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 C1orf196B1AJZ1 125 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 SERF1AO75920 110 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 ANGP03950 147 aaKnown RBP5.19□□□□□ -1.58
MSH6-211ENST00000606499 BTF3P20290 206 aaKnown RBP5.19□□□□□ -1.58
MSH6-211ENST00000606499 Q0VG73 95 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 AMMECR1LQ6DCA0 310 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 CLPSL2Q6UWE3 100 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 C2orf66Q6UXQ4 117 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 MRPL52Q86TS9 123 aaKnown RBP5.19□□□□□ -1.58
MSH6-211ENST00000606499 KLK12Q9UKR0 248 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 UBE2D4Q9Y2X8 147 aa5.19□□□□□ -1.58
MSH6-211ENST00000606499 H7C423 109 aa5.18□□□□□ -1.58
MSH6-211ENST00000606499 ZNF25P17030 456 aaPredicted RBP5.18□□□□□ -1.58
MSH6-211ENST00000606499 RAB5BP61020 215 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms