RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
PPFIA3-210ENST00000602800 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
PPFIA3-210ENST00000602800 ELOBQ15370 118 aa12.79□□□□□ -0.36
PPFIA3-210ENST00000602800 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
PPFIA3-210ENST00000602800 TRBV24-1A0A075B6N3 115 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 KRTAP29-1A8MX34 341 aaPredicted RBP12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 IGHV3-33P01772 117 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 IGHV3-30-3P0DP02 117 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 RAB4AP20338 218 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 SUMO4Q6EEV6 95 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 CBLN2Q8IUK8 224 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
PPFIA3-210ENST00000602800 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.37
PPFIA3-210ENST00000602800 MRAP2Q96G30 205 aa12.77□□□□□ -0.37
PPFIA3-210ENST00000602800 DNAH8Q96JB1 4490 aa12.77□□□□□ -0.37
PPFIA3-210ENST00000602800 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
PPFIA3-210ENST00000602800 M0QY20 66 aa12.76□□□□□ -0.37
PPFIA3-210ENST00000602800 LINC00528Q8N1L1 170 aa12.76□□□□□ -0.37
PPFIA3-210ENST00000602800 RNF185Q96GF1 192 aa12.76□□□□□ -0.37
PPFIA3-210ENST00000602800 GNB1LQ9BYB4 327 aa12.76□□□□□ -0.37
PPFIA3-210ENST00000602800 HLA-DQA1P01909 254 aa12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 LAGE3Q14657 143 aa12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 LELP1Q5T871 98 aa12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 RPL36ALQ969Q0 106 aaKnown RBP12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
PPFIA3-210ENST00000602800 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 PPP1R17O96001 155 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 MT-ND6P03923 174 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 GAGE1Q13065 139 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 GAGE4Q13068 117 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 GAGE5Q13069 117 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 MRPL51Q4U2R6 128 aaKnown RBP12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 GAGE13Q4V321 117 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 TMEM136Q6ZRR5 245 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
PPFIA3-210ENST00000602800 TRAV26-2A0A0B4J265 109 aa12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 PPBPP02775 128 aa12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 CKS2P33552 79 aa12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 Q6ZSA8 131 aa12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
PPFIA3-210ENST00000602800 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
PPFIA3-210ENST00000602800 APCSP02743 223 aa12.72□□□□□ -0.37
PPFIA3-210ENST00000602800 NEXN-AS1Q8NBZ9 246 aa12.72□□□□□ -0.37
PPFIA3-210ENST00000602800 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
PPFIA3-210ENST00000602800 SCO1O75880 301 aa12.71□□□□□ -0.37
PPFIA3-210ENST00000602800 SERTAD4-AS1Q5TG53 156 aa12.71□□□□□ -0.37
PPFIA3-210ENST00000602800 ATP6V0E2Q8NHE4 81 aa12.71□□□□□ -0.37
PPFIA3-210ENST00000602800 WFDC2Q14508 124 aa12.7□□□□□ -0.38
PPFIA3-210ENST00000602800 ORMDL3Q8N138 153 aa12.7□□□□□ -0.38
PPFIA3-210ENST00000602800 TRAPPC1Q9Y5R8 145 aa12.7□□□□□ -0.38
PPFIA3-210ENST00000602800 TRAV8-3A0A0A6YYJ7 113 aa12.69□□□□□ -0.38
PPFIA3-210ENST00000602800 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
PPFIA3-210ENST00000602800 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 D6R8Y8 96 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 LECT2O14960 151 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 NCR2O95944 276 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 UBE2D3P61077 147 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 UBE2D2P62837 147 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 FABP9Q0Z7S8 132 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 RPL39LQ96EH5 51 aaKnown RBP12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 MRPL18Q9H0U6 180 aaKnown RBP12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 Q9UF83 564 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 HMCN2Q8NDA2 5059 aa12.68□□□□□ -0.38
PPFIA3-210ENST00000602800 TRBV6-5A0A0K0K1A5 114 aa12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 LINC00694P0DN24 101 aa12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 PRELID3AQ96N28 172 aa12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 LAMTOR2Q9Y2Q5 125 aa12.67□□□□□ -0.38
PPFIA3-210ENST00000602800 COLCA2A8K830 154 aa12.66□□□□□ -0.38
PPFIA3-210ENST00000602800 PHOX2AO14813 284 aa12.66□□□□□ -0.38
PPFIA3-210ENST00000602800 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
PPFIA3-210ENST00000602800 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
PPFIA3-210ENST00000602800 GAS8-AS1O95177 125 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 TNFRSF6BO95407 300 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 TMEM97Q5BJF2 176 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 SCXQ7RTU7 201 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 Q8N3U1 123 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 NRACQ8N912 160 aa12.65□□□□□ -0.38
PPFIA3-210ENST00000602800 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
PPFIA3-210ENST00000602800 RAB5AP20339 215 aa12.64□□□□□ -0.39
PPFIA3-210ENST00000602800 KIAA1644Q3SXP7 199 aa12.64□□□□□ -0.39
PPFIA3-210ENST00000602800 BAALCQ8WXS3 180 aa12.64□□□□□ -0.39
PPFIA3-210ENST00000602800 PMCHP20382 165 aa12.63□□□□□ -0.39
PPFIA3-210ENST00000602800 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
PPFIA3-210ENST00000602800 LINC01620Q4KN68 170 aa12.63□□□□□ -0.39
PPFIA3-210ENST00000602800 RMI2Q96E14 147 aa12.63□□□□□ -0.39
PPFIA3-210ENST00000602800 LRP1Q07954 4544 aaKnown RBP12.62□□□□□ -0.39
PPFIA3-210ENST00000602800 VCYO14598 125 aa12.62□□□□□ -0.39
PPFIA3-210ENST00000602800 NPYP01303 97 aa12.62□□□□□ -0.39
PPFIA3-210ENST00000602800 Q8N976 141 aa12.62□□□□□ -0.39
PPFIA3-210ENST00000602800 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms