RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SUMO2P61956 95 aaKnown RBP9.37□□□□□ -0.91
RNF40-212ENST00000602784 RPL32P62910 135 aaKnown RBP9.37□□□□□ -0.91
RNF40-212ENST00000602784 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 TMEM262E9PQX1 116 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 VCYO14598 125 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 PMCHP20382 165 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 ELOBQ15370 118 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 ORMDL3Q8N138 153 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 Q8N3U1 123 aa9.36□□□□□ -0.91
RNF40-212ENST00000602784 D6R8Y8 96 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 AMTP48728 403 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 COX19Q49B96 90 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
RNF40-212ENST00000602784 TMEM136Q6ZRR5 245 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
RNF40-212ENST00000602784 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
RNF40-212ENST00000602784 H7C423 109 aa9.34□□□□□ -0.91
RNF40-212ENST00000602784 TSHBP01222 138 aa9.34□□□□□ -0.91
RNF40-212ENST00000602784 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
RNF40-212ENST00000602784 DNAH10Q8IVF4 4471 aa9.34□□□□□ -0.91
RNF40-212ENST00000602784 TRAV8-3A0A0A6YYJ7 113 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 PRSS29PA6NIE9 313 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 TCAPO15273 167 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 APCSP02743 223 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 GAGE6Q13070 117 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 PRELID3AQ96N28 172 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
RNF40-212ENST00000602784 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 UBE2L6O14933 153 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 NPYP01303 97 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 ESDP10768 282 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 RBX1P62877 108 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 DEFB104AQ8WTQ1 72 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 KLK12Q9UKR0 248 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
RNF40-212ENST00000602784 MT-ND6P03923 174 aa9.31□□□□□ -0.92
RNF40-212ENST00000602784 Q0VG73 95 aa9.31□□□□□ -0.92
RNF40-212ENST00000602784 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
RNF40-212ENST00000602784 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
RNF40-212ENST00000602784 FCER1GP30273 86 aa9.3□□□□□ -0.92
RNF40-212ENST00000602784 Q8N976 141 aa9.3□□□□□ -0.92
RNF40-212ENST00000602784 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
RNF40-212ENST00000602784 PRR34Q9NV39 138 aa9.3□□□□□ -0.92
RNF40-212ENST00000602784 DNAH17Q9UFH2 4485 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 TNP2Q05952 138 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 RMI2Q96E14 147 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 Q9HAA7 133 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 COX11Q9Y6N1 276 aa9.29□□□□□ -0.92
RNF40-212ENST00000602784 TGIF2-C20orf24A0A0A6YYL0 155 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 ZNF25P17030 456 aaPredicted RBP9.28□□□□□ -0.92
RNF40-212ENST00000602784 ENHOQ6UWT2 76 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 C20orf203Q8NBC4 194 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 YPEL4Q96NS1 127 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 SMCO4Q9NRQ5 59 aa9.28□□□□□ -0.92
RNF40-212ENST00000602784 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
RNF40-212ENST00000602784 A0A1B0GVY2 172 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
RNF40-212ENST00000602784 CRPP02741 224 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 FGF6P10767 208 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 SMAGPQ0VAQ4 97 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 MIAQ16674 131 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 AMMECR1LQ6DCA0 310 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 MRPL52Q86TS9 123 aaKnown RBP9.27□□□□□ -0.93
RNF40-212ENST00000602784 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 FAT2Q9NYQ8 4349 aa9.27□□□□□ -0.93
RNF40-212ENST00000602784 K7EMI3 77 aa9.26□□□□□ -0.93
RNF40-212ENST00000602784 PSCAO43653 123 aa9.26□□□□□ -0.93
RNF40-212ENST00000602784 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
RNF40-212ENST00000602784 CSDC2Q9Y534 153 aaKnown RBP9.26□□□□□ -0.93
RNF40-212ENST00000602784 RAB5AP20339 215 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 REG3AQ06141 175 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 RNASEKQ6P5S7 137 aaKnown RBP9.25□□□□□ -0.93
RNF40-212ENST00000602784 Q8N8P6 123 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 TMEM18Q96B42 140 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
RNF40-212ENST00000602784 NXT2Q9NPJ8 142 aaKnown RBP9.25□□□□□ -0.93
RNF40-212ENST00000602784 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
RNF40-212ENST00000602784 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
RNF40-212ENST00000602784 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
RNF40-212ENST00000602784 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
RNF40-212ENST00000602784 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
RNF40-212ENST00000602784 C1orf43Q9BWL3 253 aa9.24□□□□□ -0.93
RNF40-212ENST00000602784 A0A087WTM6 91 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 LRCOL1A6NCL2 159 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 EREGO14944 169 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 CBLN2Q8IUK8 224 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 TRAPPC1Q9Y5R8 145 aa9.23□□□□□ -0.93
RNF40-212ENST00000602784 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
RNF40-212ENST00000602784 DGAT2L7PQ6IED9 249 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms