RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 BAALCQ8WXS3 180 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 CHAC1Q9BUX1 264 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 SAMD10Q9BYL1 202 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 URGCP-MRPS24S4R325 110 aa6.54□□□□□ -1.36
HIF3A-219ENST00000600879 MGPP08493 103 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 S100A1P23297 94 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 CAMPP49913 170 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 HBBP68871 147 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 ATP5L2Q7Z4Y8 100 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 TM2D2Q9BX73 214 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 DPH3P1Q9H4G8 78 aa6.53□□□□□ -1.36
HIF3A-219ENST00000600879 TRAV9-1A0A075B6T8 112 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 A0A1B0GW15 77 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 F5H697 171 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 S100A8P05109 93 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 RPL37AP61513 92 aaKnown RBP6.52□□□□□ -1.37
HIF3A-219ENST00000600879 ZNF56Q15929 161 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 UFSP1Q6NVU6 142 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 KIF25-AS1Q9Y6Z4 181 aa6.52□□□□□ -1.37
HIF3A-219ENST00000600879 A0A1B0GXF2 115 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 GATA1P15976 413 aaPredicted RBP6.51□□□□□ -1.37
HIF3A-219ENST00000600879 TIRAPP58753 221 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 SH2D6Q7Z4S9 175 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 CBLN2Q8IUK8 224 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 TMEM191AQ9H0A3 160 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 SMCO4Q9NRQ5 59 aa6.51□□□□□ -1.37
HIF3A-219ENST00000600879 RAB4BP61018 213 aa6.5□□□□□ -1.37
HIF3A-219ENST00000600879 ELOBQ15370 118 aa6.5□□□□□ -1.37
HIF3A-219ENST00000600879 LELP1Q5T871 98 aa6.5□□□□□ -1.37
HIF3A-219ENST00000600879 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
HIF3A-219ENST00000600879 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
HIF3A-219ENST00000600879 DNAJC30Q96LL9 226 aa6.5□□□□□ -1.37
HIF3A-219ENST00000600879 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
HIF3A-219ENST00000600879 TGIF2-C20orf24A0A0A6YYL0 155 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 SCO1O75880 301 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 LAGE3Q14657 143 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 RHOHQ15669 191 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 SUMO4Q6EEV6 95 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 RASL11AQ6T310 242 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 GATD1Q8NB37 220 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 PRADC1Q9BSG0 188 aa6.49□□□□□ -1.37
HIF3A-219ENST00000600879 TRBV24-1A0A075B6N3 115 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 H7C1H1 209 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 RAB4AP20338 218 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 COX19Q49B96 90 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 RNF185Q96GF1 192 aa6.48□□□□□ -1.37
HIF3A-219ENST00000600879 IGKV2D-24A0A075B6R9 120 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 TRAV8-3A0A0A6YYJ7 113 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 TRAV26-2A0A0B4J265 109 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 HLA-DQA1P01909 254 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 MRPL51Q4U2R6 128 aaKnown RBP6.47□□□□□ -1.37
HIF3A-219ENST00000600879 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 ATP6V0E2Q8NHE4 81 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 MRAP2Q96G30 205 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 YPEL4Q96NS1 127 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 GNB1LQ9BYB4 327 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 GTSF1LQ9H1H1 148 aa6.47□□□□□ -1.37
HIF3A-219ENST00000600879 TRBV10-1A0A0K0K1A3 114 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 GAGE12JA6NER3 117 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 SMKR1H3BMG3 65 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 M0QY20 66 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 NCR2O95944 276 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 RPL36AP83881 106 aaKnown RBP6.46□□□□□ -1.38
HIF3A-219ENST00000600879 GAGE1Q13065 139 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 GAGE4Q13068 117 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 GAGE5Q13069 117 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 GAGE13Q4V321 117 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 Q8N976 141 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 NEXN-AS1Q8NBZ9 246 aa6.46□□□□□ -1.38
HIF3A-219ENST00000600879 RPL36ALQ969Q0 106 aaKnown RBP6.46□□□□□ -1.38
HIF3A-219ENST00000600879 TNXBP22105 4242 aa6.45□□□□□ -1.38
HIF3A-219ENST00000600879 MT-ND6P03923 174 aa6.45□□□□□ -1.38
HIF3A-219ENST00000600879 CKS2P33552 79 aa6.45□□□□□ -1.38
HIF3A-219ENST00000600879 NIT2Q9NQR4 276 aa6.45□□□□□ -1.38
HIF3A-219ENST00000600879 Q9UF83 564 aa6.45□□□□□ -1.38
HIF3A-219ENST00000600879 TRBV7-3A0A075B6L6 115 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 D6R8Y8 96 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 APCSP02743 223 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 FABP9Q0Z7S8 132 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 RPL39LQ96EH5 51 aaKnown RBP6.44□□□□□ -1.38
HIF3A-219ENST00000600879 MRPL18Q9H0U6 180 aaKnown RBP6.44□□□□□ -1.38
HIF3A-219ENST00000600879 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
HIF3A-219ENST00000600879 COLCA2A8K830 154 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 PPP1R17O96001 155 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 PPBPP02775 128 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 RPS10P46783 165 aaKnown RBP6.43□□□□□ -1.38
HIF3A-219ENST00000600879 KIAA1644Q3SXP7 199 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 ORMDL3Q8N138 153 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
HIF3A-219ENST00000600879 RMI2Q96E14 147 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 PRELID3AQ96N28 172 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 ST20Q9HBF5 79 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
HIF3A-219ENST00000600879 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms