RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 MPV17L2Q567V2 206 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 KCNIP4Q6PIL6 250 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 C10orf126Q8N4M7 172 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.22□□□□□ -0.93
VRK3-219ENST00000600137 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
VRK3-219ENST00000600137 DNAH5Q8TE73 4624 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 I3L3M4 83 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 TNFRSF6BO95407 300 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 NPYP01303 97 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 ESDP10768 282 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 SUMO2P61956 95 aaKnown RBP9.21□□□□□ -0.94
VRK3-219ENST00000600137 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
VRK3-219ENST00000600137 COTL1Q14019 142 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 LINC00336Q6ZUF6 198 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 YPEL4Q96NS1 127 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
VRK3-219ENST00000600137 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 PPP1R17O96001 155 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 PPBPP02775 128 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 TNP2Q05952 138 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 GAGE6Q13070 117 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 ELOBQ15370 118 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 Q8N976 141 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
VRK3-219ENST00000600137 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 VCYO14598 125 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 PHOX2AO14813 284 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 PMCHP20382 165 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 S100PP25815 95 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 RBX1P62877 108 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 LAGE3Q14657 143 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
VRK3-219ENST00000600137 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 A0A087WX48 190 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 TGIF2-C20orf24A0A0A6YYL0 155 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 AMTP48728 403 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
VRK3-219ENST00000600137 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
VRK3-219ENST00000600137 PKHD1P08F94 4074 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
VRK3-219ENST00000600137 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
VRK3-219ENST00000600137 APCSP02743 223 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 PKIAP61925 76 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 KIAA1644Q3SXP7 199 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 NFE4Q86UQ8 179 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
VRK3-219ENST00000600137 H7C423 109 aa9.15□□□□□ -0.94
VRK3-219ENST00000600137 HLA-DQA1P01909 254 aa9.15□□□□□ -0.94
VRK3-219ENST00000600137 COX19Q49B96 90 aa9.15□□□□□ -0.94
VRK3-219ENST00000600137 Q9HAA7 133 aa9.15□□□□□ -0.94
VRK3-219ENST00000600137 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
VRK3-219ENST00000600137 TRAV8-3A0A0A6YYJ7 113 aa9.14□□□□□ -0.95
VRK3-219ENST00000600137 LRCOL1A6NCL2 159 aa9.14□□□□□ -0.95
VRK3-219ENST00000600137 ANGP03950 147 aaKnown RBP9.14□□□□□ -0.95
VRK3-219ENST00000600137 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
VRK3-219ENST00000600137 UBE2WQ96B02 151 aa9.14□□□□□ -0.95
VRK3-219ENST00000600137 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
VRK3-219ENST00000600137 FGF6P10767 208 aa9.13□□□□□ -0.95
VRK3-219ENST00000600137 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
VRK3-219ENST00000600137 LINC00269Q8N2A0 174 aa9.13□□□□□ -0.95
VRK3-219ENST00000600137 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
VRK3-219ENST00000600137 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
VRK3-219ENST00000600137 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
VRK3-219ENST00000600137 TCAPO15273 167 aa9.12□□□□□ -0.95
VRK3-219ENST00000600137 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
VRK3-219ENST00000600137 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
VRK3-219ENST00000600137 A0A087WTM6 91 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 LOC389332A0A1B0GUA5 103 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 UBE2L6O14933 153 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 MT-ND6P03923 174 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 WFDC2Q14508 124 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 Q8N8P6 123 aa9.11□□□□□ -0.95
VRK3-219ENST00000600137 FCER1GP30273 86 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 REG3AQ06141 175 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 Q0VG73 95 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
VRK3-219ENST00000600137 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
VRK3-219ENST00000600137 IFI27P40305 119 aaPredicted RBP9.09□□□□□ -0.95
VRK3-219ENST00000600137 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
VRK3-219ENST00000600137 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
VRK3-219ENST00000600137 MIAQ16674 131 aa9.09□□□□□ -0.95
VRK3-219ENST00000600137 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
VRK3-219ENST00000600137 CSDC2Q9Y534 153 aaKnown RBP9.09□□□□□ -0.95
VRK3-219ENST00000600137 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
VRK3-219ENST00000600137 RNASEKQ6P5S7 137 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms