RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	C18orf32	Q8TCD1	76 aa		15.14	■□□□□ 0.01
LTBP4-227	ENST00000600026	NXT2	Q9NPJ8	142 aa	Known RBP	15.14	■□□□□ 0.01
LTBP4-227	ENST00000600026	TCAP	O15273	167 aa		15.13	■□□□□ 0.01
LTBP4-227	ENST00000600026	LINC00588	Q9Y4M8	146 aa		15.13	■□□□□ 0.01
LTBP4-227	ENST00000600026	FCER1G	P30273	86 aa		15.12	■□□□□ 0.01
LTBP4-227	ENST00000600026	TIRAP	P58753	221 aa		15.12	■□□□□ 0.01
LTBP4-227	ENST00000600026	IQCJ	Q1A5X6	159 aa		15.12	■□□□□ 0.01
LTBP4-227	ENST00000600026	LYPD5	Q6UWN5	251 aa		15.12	■□□□□ 0.01
LTBP4-227	ENST00000600026	IFI27	P40305	119 aa	Predicted RBP	15.11	■□□□□ 0.01
LTBP4-227	ENST00000600026	RAB5B	P61020	215 aa		15.1	■□□□□ 0.01
LTBP4-227	ENST00000600026	FA2H	Q7L5A8	372 aa		15.1	■□□□□ 0.01
LTBP4-227	ENST00000600026	KMT2A	Q03164	3969 aa		15.1	■□□□□ 0.01
LTBP4-227	ENST00000600026	IGLV2-18	A0A075B6J9	118 aa		15.09	■□□□□ 0.01
LTBP4-227	ENST00000600026	TSHB	P01222	138 aa		15.09	■□□□□ 0.01
LTBP4-227	ENST00000600026	DEFB104A	Q8WTQ1	72 aa		15.09	■□□□□ 0.01
LTBP4-227	ENST00000600026	MRPS16	Q9Y3D3	137 aa	Known RBP	15.09	■□□□□ 0.01
LTBP4-227	ENST00000600026	TRBV25-1	A0A075B6N4	114 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	TRBV6-8	A0A0A6YYG3	113 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	IGHV1-24	A0A0C4DH33	117 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026		K7EMI3	77 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	AMT	P48728	403 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026		Q0VG73	95 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	LELP1	Q5T871	98 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	BAGE3	Q86Y29	109 aa		15.08	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BK	O60814	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BJ	P06899	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BO	P23527	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BB	P33778	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BD	P58876	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BC	P62807	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST2H2BE	Q16778	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	15.07	■□□□□ 0
LTBP4-227	ENST00000600026	NTM-AS1	Q6ZSK4	140 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BH	Q93079	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BN	Q99877	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	HIST1H2BM	Q99879	126 aa		15.07	■□□□□ 0
LTBP4-227	ENST00000600026	TRAV8-6	A0A0B4J262	113 aa		15.06	■□□□□ 0
LTBP4-227	ENST00000600026	NIT1	Q86X76	327 aa		15.06	■□□□□ 0
LTBP4-227	ENST00000600026	UPK3B	Q9BT76	320 aa		15.06	■□□□□ 0
LTBP4-227	ENST00000600026	LINC00614	P0C842	121 aa		15.05	■□□□□ -0
LTBP4-227	ENST00000600026	LAGE3	Q14657	143 aa		15.05	■□□□□ -0
LTBP4-227	ENST00000600026	ORMDL2	Q53FV1	153 aa		15.05	■□□□□ -0
LTBP4-227	ENST00000600026	TMEM243	Q9BU79	118 aa		15.05	■□□□□ -0
LTBP4-227	ENST00000600026	RNASEK	Q6P5S7	137 aa	Known RBP	15.04	■□□□□ -0
LTBP4-227	ENST00000600026	AP5S1	Q9NUS5	200 aa		15.04	■□□□□ -0
LTBP4-227	ENST00000600026	CHCHD5	Q9BSY4	110 aa		15.03	■□□□□ -0
LTBP4-227	ENST00000600026	LINC01546	A6NGU7	62 aa		15.02	■□□□□ -0
LTBP4-227	ENST00000600026	UBE2L6	O14933	153 aa		15.02	■□□□□ -0
LTBP4-227	ENST00000600026	G0S2	P27469	103 aa		15.02	■□□□□ -0
LTBP4-227	ENST00000600026	TMEM18	Q96B42	140 aa		15.02	■□□□□ -0
LTBP4-227	ENST00000600026	CHCHD1	Q96BP2	118 aa	Known RBP	15.02	■□□□□ -0
LTBP4-227	ENST00000600026	CHCHD7	Q9BUK0	85 aa		15.02	■□□□□ -0
LTBP4-227	ENST00000600026	ESD	P10768	282 aa		15.01	□□□□□ -0.01
LTBP4-227	ENST00000600026	PKIA	P61925	76 aa		15.01	□□□□□ -0.01
LTBP4-227	ENST00000600026	URB1-AS1	Q96HZ7	61 aa		15.01	□□□□□ -0.01
LTBP4-227	ENST00000600026		H7C423	109 aa		14.99	□□□□□ -0.01
LTBP4-227	ENST00000600026	SMAGP	Q0VAQ4	97 aa		14.99	□□□□□ -0.01
LTBP4-227	ENST00000600026	WFDC10B	Q8IUB3	73 aa		14.99	□□□□□ -0.01
LTBP4-227	ENST00000600026	C20orf203	Q8NBC4	194 aa		14.99	□□□□□ -0.01
LTBP4-227	ENST00000600026		Q9H8V8	135 aa		14.99	□□□□□ -0.01
LTBP4-227	ENST00000600026	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	14.98	□□□□□ -0.01
LTBP4-227	ENST00000600026	IGKV2-29	A2NJV5	120 aa	Predicted RBP	14.98	□□□□□ -0.01
LTBP4-227	ENST00000600026	SERF1A	O75920	110 aa		14.98	□□□□□ -0.01
LTBP4-227	ENST00000600026	NDUFA6	P56556	154 aa		14.98	□□□□□ -0.01
LTBP4-227	ENST00000600026	GAGE6	Q13070	117 aa		14.98	□□□□□ -0.01
LTBP4-227	ENST00000600026	TMEM262	E9PQX1	116 aa		14.97	□□□□□ -0.01
LTBP4-227	ENST00000600026	HSBP1	O75506	76 aa		14.97	□□□□□ -0.01
LTBP4-227	ENST00000600026	BTF3	P20290	206 aa	Known RBP	14.97	□□□□□ -0.01
LTBP4-227	ENST00000600026	CYSLTR1	Q9Y271	337 aa		14.97	□□□□□ -0.01
LTBP4-227	ENST00000600026	SIVA1	O15304	175 aa		14.96	□□□□□ -0.01
LTBP4-227	ENST00000600026	AMMECR1L	Q6DCA0	310 aa		14.96	□□□□□ -0.01
LTBP4-227	ENST00000600026		A0A087WX48	190 aa		14.95	□□□□□ -0.02
LTBP4-227	ENST00000600026	LINC01549	A6NIU2	74 aa		14.95	□□□□□ -0.02
LTBP4-227	ENST00000600026		M0R2N4	97 aa		14.95	□□□□□ -0.02
LTBP4-227	ENST00000600026	C2orf66	Q6UXQ4	117 aa		14.95	□□□□□ -0.02
LTBP4-227	ENST00000600026	S100A6	P06703	90 aa		14.94	□□□□□ -0.02
LTBP4-227	ENST00000600026	DNAH2	Q9P225	4427 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	NBDY	A0A0U1RRE5	68 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	HBD	P02042	147 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	FGF6	P10767	208 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	LINC00310	P59036	64 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	RPL39	P62891	51 aa	Known RBP	14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	COA6	Q5JTJ3	125 aa	Known RBP	14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	TMEM101	Q96IK0	257 aa		14.93	□□□□□ -0.02
LTBP4-227	ENST00000600026	ZNF25	P17030	456 aa	Predicted RBP	14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026	DGAT2L7P	Q6IED9	249 aa		14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026		Q6ZR54	194 aa		14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026	MRPL52	Q86TS9	123 aa	Known RBP	14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026	TOMM6	Q96B49	74 aa		14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026	DNAH10	Q8IVF4	4471 aa		14.92	□□□□□ -0.02
LTBP4-227	ENST00000600026	PMCHL1	Q16048	86 aa		14.91	□□□□□ -0.02
LTBP4-227	ENST00000600026	TIMM21	Q9BVV7	248 aa		14.91	□□□□□ -0.02
LTBP4-227	ENST00000600026		A0A1B0GUV1	79 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	NUPR1	O60356	82 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	DNAH10OS	P0CZ25	163 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	MPV17L2	Q567V2	206 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	LINC01556	Q5JQF7	62 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	KRTAP1-5	Q9BYS1	174 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	SPANXA1	Q9NS26	97 aa		14.9	□□□□□ -0.02
LTBP4-227	ENST00000600026	UBE2D4	Q9Y2X8	147 aa		14.9	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms