RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 ID1P41134 155 aa12.33□□□□□ -0.43
GRAMD1A-211ENST00000599564 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.43
GRAMD1A-211ENST00000599564 MRPS36P82909 103 aaKnown RBP12.33□□□□□ -0.44
GRAMD1A-211ENST00000599564 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
GRAMD1A-211ENST00000599564 MOB4Q9Y3A3 225 aa12.33□□□□□ -0.44
GRAMD1A-211ENST00000599564 C19orf54Q5BKX5 351 aa12.33□□□□□ -0.44
GRAMD1A-211ENST00000599564 VSIG2Q96IQ7 327 aa12.33□□□□□ -0.44
GRAMD1A-211ENST00000599564 LOC107984640A0A0U1RRK4 108 aa12.32□□□□□ -0.44
GRAMD1A-211ENST00000599564 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
GRAMD1A-211ENST00000599564 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.447e-7■■■■□ 21
GRAMD1A-211ENST00000599564 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
GRAMD1A-211ENST00000599564 DEFB121Q5J5C9 76 aa12.32□□□□□ -0.44
GRAMD1A-211ENST00000599564 PRM2P04554 102 aa12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 CRYBG3Q68DQ2 2970 aa12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 ATRXP46100 2492 aa12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 IGKV2-29A2NJV5 120 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 CITED2Q99967 270 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 DAZ1Q9NQZ3 744 aaKnown RBP12.31□□□□□ -0.44
GRAMD1A-211ENST00000599564 A0A1W2PPR1 153 aa12.3□□□□□ -0.44
GRAMD1A-211ENST00000599564 DCANP1Q8TF63 244 aa12.3□□□□□ -0.44
GRAMD1A-211ENST00000599564 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
GRAMD1A-211ENST00000599564 BPESC1Q9GZL8 116 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 CUBNO60494 3623 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 YAE1D1Q9NRH1 226 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 BLCAPP62952 87 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 SPANXA1Q9NS26 97 aa12.29□□□□□ -0.44
GRAMD1A-211ENST00000599564 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
GRAMD1A-211ENST00000599564 IGHG2P01859 326 aa12.28□□□□□ -0.44
GRAMD1A-211ENST00000599564 Q8N2B8 174 aa12.28□□□□□ -0.44
GRAMD1A-211ENST00000599564 CDKN2A-AS1Q9UH64 79 aa12.27□□□□□ -0.44
GRAMD1A-211ENST00000599564 NACAE9PAV3 2078 aa12.27□□□□□ -0.44
GRAMD1A-211ENST00000599564 CREBBPQ92793 2442 aa12.27□□□□□ -0.45
GRAMD1A-211ENST00000599564 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
GRAMD1A-211ENST00000599564 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
GRAMD1A-211ENST00000599564 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
GRAMD1A-211ENST00000599564 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
GRAMD1A-211ENST00000599564 PTPRQQ9UMZ3 2332 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 RS1O15537 224 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 NDUFA7O95182 113 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 HERVK_113P63121 156 aa12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
GRAMD1A-211ENST00000599564 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
GRAMD1A-211ENST00000599564 LMO4P61968 165 aa12.24□□□□□ -0.45
GRAMD1A-211ENST00000599564 MUC6Q6W4X9 2439 aa12.24□□□□□ -0.45
GRAMD1A-211ENST00000599564 Q6ZSN1 163 aa12.24□□□□□ -0.45
GRAMD1A-211ENST00000599564 USMG5Q96IX5 58 aa12.24□□□□□ -0.45
GRAMD1A-211ENST00000599564 ABCA2Q9BZC7 2435 aa12.23□□□□□ -0.45
GRAMD1A-211ENST00000599564 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
GRAMD1A-211ENST00000599564 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
GRAMD1A-211ENST00000599564 LINC00308Q8TCZ7 52 aa12.23□□□□□ -0.45
GRAMD1A-211ENST00000599564 Q9H8V8 135 aa12.23□□□□□ -0.45
GRAMD1A-211ENST00000599564 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 LINC00643Q86TS7 51 aa12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 CHCHD7Q9BUK0 85 aa12.22□□□□□ -0.45
GRAMD1A-211ENST00000599564 H3BUX3 64 aa12.21□□□□□ -0.45
GRAMD1A-211ENST00000599564 COX7A2LO14548 114 aa12.21□□□□□ -0.45
GRAMD1A-211ENST00000599564 COX6A2Q02221 97 aa12.21□□□□□ -0.45
GRAMD1A-211ENST00000599564 GAGE2AQ6NT46 116 aa12.21□□□□□ -0.45
GRAMD1A-211ENST00000599564 ACYP1P07311 99 aa12.21□□□□□ -0.46
GRAMD1A-211ENST00000599564 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.46
GRAMD1A-211ENST00000599564 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.46
GRAMD1A-211ENST00000599564 IMUPQ9GZP8 106 aa12.21□□□□□ -0.46
GRAMD1A-211ENST00000599564 FAM218AQ96MZ4 157 aa12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 Q9HAA7 133 aa12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 UQCRQO14949 82 aa12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 C10orf99Q6UWK7 81 aa12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 CSDC2Q9Y534 153 aaKnown RBP12.2□□□□□ -0.46
GRAMD1A-211ENST00000599564 NRGNQ92686 78 aa12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 DNAJC30Q96LL9 226 aa12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 IGHV4-38-2P0DP08 117 aa12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 TIRAPP58753 221 aa12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 EDA2RQ9HAV5 297 aa12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 CIRBPQ14011 172 aaKnown RBP12.19□□□□□ -0.46
GRAMD1A-211ENST00000599564 NDUFA1O15239 70 aa12.18□□□□□ -0.46
GRAMD1A-211ENST00000599564 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
GRAMD1A-211ENST00000599564 C22orf24Q9Y442 160 aa12.18□□□□□ -0.46
GRAMD1A-211ENST00000599564 LINC00526Q96FQ7 95 aa12.18□□□□□ -0.46
GRAMD1A-211ENST00000599564 ATP5J2P56134 94 aa12.17□□□□□ -0.46
GRAMD1A-211ENST00000599564 CYSTM1Q9H1C7 97 aa12.17□□□□□ -0.46
GRAMD1A-211ENST00000599564 TIMM17BO60830 172 aa12.16□□□□□ -0.46
GRAMD1A-211ENST00000599564 CSPG4Q6UVK1 2322 aa12.16□□□□□ -0.46
GRAMD1A-211ENST00000599564 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
GRAMD1A-211ENST00000599564 TRAV13-1A0A0B4J241 112 aa12.15□□□□□ -0.46
GRAMD1A-211ENST00000599564 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
GRAMD1A-211ENST00000599564 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.46
GRAMD1A-211ENST00000599564 hADV29S1A0JD25 119 aa12.15□□□□□ -0.46
GRAMD1A-211ENST00000599564 BEAN1Q3B7T3 259 aa12.15□□□□□ -0.46
GRAMD1A-211ENST00000599564 KLRB1Q12918 225 aa12.15□□□□□ -0.47
GRAMD1A-211ENST00000599564 FAM19A5Q7Z5A7 132 aaPredicted RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms