RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 OR2D3Q8NGH3 330 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SMIM12Q96EX1 92 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
SMG9-208ENST00000598886 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
SMG9-208ENST00000598886 MGPP08493 103 aa10.01□□□□□ -0.81
SMG9-208ENST00000598886 RPS20P60866 119 aaKnown RBP10.01□□□□□ -0.81
SMG9-208ENST00000598886 PGLYRP4Q96LB8 373 aa10.01□□□□□ -0.81
SMG9-208ENST00000598886 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
SMG9-208ENST00000598886 NDUFS6O75380 124 aaKnown RBP10□□□□□ -0.81
SMG9-208ENST00000598886 MT1HL1P0DM35 61 aa10□□□□□ -0.81
SMG9-208ENST00000598886 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
SMG9-208ENST00000598886 CTRLP40313 264 aa10□□□□□ -0.81
SMG9-208ENST00000598886 CACNG7P62955 275 aa10□□□□□ -0.81
SMG9-208ENST00000598886 RASL11AQ6T310 242 aa10□□□□□ -0.81
SMG9-208ENST00000598886 TPPP3Q9BW30 176 aa10□□□□□ -0.81
SMG9-208ENST00000598886 CNFNQ9BYD5 112 aa10□□□□□ -0.81
SMG9-208ENST00000598886 H7C1H1 209 aa9.99□□□□□ -0.81
SMG9-208ENST00000598886 IFNA1P01562 189 aa9.99□□□□□ -0.81
SMG9-208ENST00000598886 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
SMG9-208ENST00000598886 PEA15Q15121 130 aa9.99□□□□□ -0.81
SMG9-208ENST00000598886 LYZL1Q6UWQ5 148 aa9.99□□□□□ -0.81
SMG9-208ENST00000598886 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
SMG9-208ENST00000598886 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 F2Z2F3 143 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 P01737 135 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 BCL2P10415 239 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 GNG4P50150 75 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 SRSF3P84103 164 aaKnown RBP9.98□□□□□ -0.81
SMG9-208ENST00000598886 TMEM243Q9BU79 118 aa9.98□□□□□ -0.81
SMG9-208ENST00000598886 TMEM218A2RU14 115 aa9.97□□□□□ -0.81
SMG9-208ENST00000598886 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
SMG9-208ENST00000598886 EIF5A2Q9GZV4 153 aaKnown RBP9.97□□□□□ -0.81
SMG9-208ENST00000598886 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
SMG9-208ENST00000598886 NIT2Q9NQR4 276 aa9.97□□□□□ -0.81
SMG9-208ENST00000598886 PDE6DO43924 150 aa9.96□□□□□ -0.82
SMG9-208ENST00000598886 NTF3P20783 257 aa9.96□□□□□ -0.82
SMG9-208ENST00000598886 WDR73Q6P4I2 378 aa9.96□□□□□ -0.82
SMG9-208ENST00000598886 hDV102S1A0JD36 115 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 K7EN84 100 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 TRGC1P0CF51 173 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 CHTF8P0CG12 524 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 C10orf91Q5T1B1 145 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 GATD1Q8NB37 220 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 NUDT10Q8NFP7 164 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 SPACA4Q8TDM5 124 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 NUDT11Q96G61 164 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 SEC11CQ9BY50 192 aa9.95□□□□□ -0.82
SMG9-208ENST00000598886 CARHSP1Q9Y2V2 147 aaKnown RBP9.95□□□□□ -0.82
SMG9-208ENST00000598886 TNXBP22105 4242 aa9.94□□□□□ -0.82
SMG9-208ENST00000598886 C9JQL5 133 aa9.94□□□□□ -0.82
SMG9-208ENST00000598886 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
SMG9-208ENST00000598886 SRP19P09132 144 aaKnown RBP9.93□□□□□ -0.82
SMG9-208ENST00000598886 ADCYAP1P18509 176 aa9.93□□□□□ -0.82
SMG9-208ENST00000598886 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 A0A087WYN8 130 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 TRAV26-2A0A0B4J265 109 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 AMTP48728 403 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 RNF185Q96GF1 192 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 RNASE7Q9H1E1 156 aaKnown RBP9.92□□□□□ -0.82
SMG9-208ENST00000598886 PLAC8Q9NZF1 115 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 PLA2G2DQ9UNK4 145 aa9.92□□□□□ -0.82
SMG9-208ENST00000598886 F8W036 122 aa9.91□□□□□ -0.82
SMG9-208ENST00000598886 TMEM250H0YL14 139 aa9.91□□□□□ -0.82
SMG9-208ENST00000598886 COTL1Q14019 142 aa9.91□□□□□ -0.82
SMG9-208ENST00000598886 RPP21Q9H633 154 aaKnown RBP9.91□□□□□ -0.82
SMG9-208ENST00000598886 BIN3Q9NQY0 253 aa9.91□□□□□ -0.82
SMG9-208ENST00000598886 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
SMG9-208ENST00000598886 Q6ZRU5 148 aa9.9□□□□□ -0.82
SMG9-208ENST00000598886 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
SMG9-208ENST00000598886 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
SMG9-208ENST00000598886 GAGE12HA6NDE8 117 aa9.89□□□□□ -0.83
SMG9-208ENST00000598886 TWIST1Q15672 202 aa9.89□□□□□ -0.83
SMG9-208ENST00000598886 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
SMG9-208ENST00000598886 SVBPQ8N300 66 aa9.88□□□□□ -0.83
SMG9-208ENST00000598886 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
SMG9-208ENST00000598886 FAM231BA6NCW3 169 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 UBE2L6O14933 153 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 NCR2O95944 276 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 APOC3P02656 99 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 FAM74A3Q4VXF1 159 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
SMG9-208ENST00000598886 H7C423 109 aa9.86□□□□□ -0.83
SMG9-208ENST00000598886 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
SMG9-208ENST00000598886 FOXI1Q12951 378 aa9.86□□□□□ -0.83
SMG9-208ENST00000598886 CHCHD10Q8WYQ3 142 aaPredicted RBP9.86□□□□□ -0.83
SMG9-208ENST00000598886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.85□□□□□ -0.83
SMG9-208ENST00000598886 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 IGKV2-29A2NJV5 120 aaPredicted RBP9.85□□□□□ -0.83
SMG9-208ENST00000598886 PHOX2AO14813 284 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 SNAPINO95295 136 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 FGF6P10767 208 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 COX6A2Q02221 97 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 HIGD2BQ4VC39 106 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 FAM231DQ6ZW35 169 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 PRSS3P2Q8NHM4 247 aa9.85□□□□□ -0.83
SMG9-208ENST00000598886 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
SMG9-208ENST00000598886 ESDP10768 282 aa9.84□□□□□ -0.83
SMG9-208ENST00000598886 RPS10P46783 165 aaKnown RBP9.84□□□□□ -0.83
SMG9-208ENST00000598886 LRP2P98164 4655 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms