RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
ARHGEF1-217ENST00000598812 PRR34Q9NV39 138 aa12.95□□□□□ -0.34
ARHGEF1-217ENST00000598812 PGLYRP4Q96LB8 373 aa12.94□□□□□ -0.34
ARHGEF1-217ENST00000598812 TMEM243Q9BU79 118 aa12.94□□□□□ -0.34
ARHGEF1-217ENST00000598812 A8MWL6 223 aa12.93□□□□□ -0.34
ARHGEF1-217ENST00000598812 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
ARHGEF1-217ENST00000598812 USP17L23D6RBM5 183 aa12.92□□□□□ -0.34
ARHGEF1-217ENST00000598812 TMEM241Q24JQ0 296 aa12.92□□□□□ -0.34
ARHGEF1-217ENST00000598812 MYCBP2O75592 4640 aa12.92□□□□□ -0.34
ARHGEF1-217ENST00000598812 UBE2L6O14933 153 aa12.91□□□□□ -0.34
ARHGEF1-217ENST00000598812 REG3AQ06141 175 aa12.91□□□□□ -0.34
ARHGEF1-217ENST00000598812 COTL1Q14019 142 aa12.91□□□□□ -0.34
ARHGEF1-217ENST00000598812 FLG2Q5D862 2391 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF1-217ENST00000598812 TRAV26-2A0A0B4J265 109 aa12.9□□□□□ -0.34
ARHGEF1-217ENST00000598812 FAM74A3Q4VXF1 159 aa12.9□□□□□ -0.34
ARHGEF1-217ENST00000598812 DEFB104AQ8WTQ1 72 aa12.9□□□□□ -0.34
ARHGEF1-217ENST00000598812 UBR4Q5T4S7 5183 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 A0A1B0GUV1 79 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 AMTP48728 403 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 RPL23P62829 140 aaKnown RBP12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 ADIRFQ15847 76 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 OSTCQ9NRP0 149 aa12.89□□□□□ -0.35
ARHGEF1-217ENST00000598812 PLA2G1BP04054 148 aaKnown RBP12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 FOXA3P55318 350 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 CT83Q5H943 113 aa12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 SCXQ7RTU7 201 aa12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 C20orf203Q8NBC4 194 aa12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 NAT8Q9UHE5 227 aa12.88□□□□□ -0.35
ARHGEF1-217ENST00000598812 IGLV10-54A0A075B6I4 117 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 RAB14P61106 215 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 ISOC2Q96AB3 205 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 BORCS7Q96B45 105 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 CHAC1Q9BUX1 264 aa12.87□□□□□ -0.35
ARHGEF1-217ENST00000598812 IGLV4-60A0A075B6I1 120 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 PRSS1P07477 247 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 KRTAP26-1Q6PEX3 210 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 V9GYV3 84 aa12.86□□□□□ -0.35
ARHGEF1-217ENST00000598812 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
ARHGEF1-217ENST00000598812 RPL39LQ96EH5 51 aaKnown RBP12.85□□□□□ -0.35
ARHGEF1-217ENST00000598812 DGAT2L7PQ6IED9 249 aa12.84□□□□□ -0.35
ARHGEF1-217ENST00000598812 GFRA4Q9GZZ7 299 aa12.84□□□□□ -0.35
ARHGEF1-217ENST00000598812 A0A1B0GUT8 65 aa12.82□□□□□ -0.36
ARHGEF1-217ENST00000598812 SDHAF1A6NFY7 115 aa12.82□□□□□ -0.36
ARHGEF1-217ENST00000598812 NCR2O95944 276 aa12.82□□□□□ -0.36
ARHGEF1-217ENST00000598812 CLRN3Q8NCR9 226 aa12.82□□□□□ -0.36
ARHGEF1-217ENST00000598812 APCSP02743 223 aa12.81□□□□□ -0.36
ARHGEF1-217ENST00000598812 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
ARHGEF1-217ENST00000598812 CIRBP-AS1Q8TBR5 109 aa12.81□□□□□ -0.36
ARHGEF1-217ENST00000598812 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
ARHGEF1-217ENST00000598812 NUP35Q8NFH5 326 aa12.8□□□□□ -0.36
ARHGEF1-217ENST00000598812 hDV102S1A0JD36 115 aa12.79□□□□□ -0.36
ARHGEF1-217ENST00000598812 RNASEKQ6P5S7 137 aaKnown RBP12.79□□□□□ -0.36
ARHGEF1-217ENST00000598812 C9orf163Q8N9P6 203 aa12.79□□□□□ -0.36
ARHGEF1-217ENST00000598812 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 IGKV2-29A2NJV5 120 aaPredicted RBP12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 H7C423 109 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 I3L3M4 83 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 PMCHP20382 165 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 IFITM2Q01629 132 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 RIGQ13278 110 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 NAT8BQ9UHF3 227 aa12.78□□□□□ -0.36
ARHGEF1-217ENST00000598812 TRBV6-5A0A0K0K1A5 114 aa12.77□□□□□ -0.37
ARHGEF1-217ENST00000598812 CLLU1Q5K131 121 aa12.77□□□□□ -0.37
ARHGEF1-217ENST00000598812 ST20Q9HBF5 79 aa12.77□□□□□ -0.37
ARHGEF1-217ENST00000598812 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
ARHGEF1-217ENST00000598812 GAS8-AS1O95177 125 aa12.76□□□□□ -0.37
ARHGEF1-217ENST00000598812 FGF6P10767 208 aa12.76□□□□□ -0.37
ARHGEF1-217ENST00000598812 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
ARHGEF1-217ENST00000598812 CNBPP62633 177 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-217ENST00000598812 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
ARHGEF1-217ENST00000598812 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
ARHGEF1-217ENST00000598812 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF1-217ENST00000598812 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
ARHGEF1-217ENST00000598812 RAB4AP20338 218 aa12.74□□□□□ -0.37
ARHGEF1-217ENST00000598812 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
ARHGEF1-217ENST00000598812 BTF3L4Q96K17 158 aa12.74□□□□□ -0.37
ARHGEF1-217ENST00000598812 ZNF25P17030 456 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-217ENST00000598812 CFAP161Q6P656 301 aa12.73□□□□□ -0.37
ARHGEF1-217ENST00000598812 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
ARHGEF1-217ENST00000598812 J3QL48 77 aa12.72□□□□□ -0.37
ARHGEF1-217ENST00000598812 CAMPP49913 170 aa12.72□□□□□ -0.37
ARHGEF1-217ENST00000598812 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
ARHGEF1-217ENST00000598812 CHCHD10Q8WYQ3 142 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-217ENST00000598812 TMEM242Q9NWH2 141 aa12.72□□□□□ -0.37
ARHGEF1-217ENST00000598812 SMKR1H3BMG3 65 aa12.71□□□□□ -0.37
ARHGEF1-217ENST00000598812 TSHBP01222 138 aa12.71□□□□□ -0.37
ARHGEF1-217ENST00000598812 RPS10P46783 165 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-217ENST00000598812 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-217ENST00000598812 IGHV3-64A0A075B6Q5 118 aa12.7□□□□□ -0.38
ARHGEF1-217ENST00000598812 MRPL54Q6P161 138 aaKnown RBP12.7□□□□□ -0.38
ARHGEF1-217ENST00000598812 OR5A1Q8NGJ0 315 aa12.7□□□□□ -0.38
ARHGEF1-217ENST00000598812 TRBV27A0A0K0K1C4 114 aa12.69□□□□□ -0.38
ARHGEF1-217ENST00000598812 PPP1R17O96001 155 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms