RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 MGPP08493 103 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 FGF7P21781 194 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SPRR2EP22531 72 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SPRR2BP35325 72 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SPRR2AP35326 72 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 ID3Q02535 119 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SPAG11BQ08648 103 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 PPP1R1AQ13522 171 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 TMEM14EPQ6UXP3 125 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 C5orf38Q86SI9 138 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 SMIM8Q96KF7 97 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 C2orf48Q96LS8 159 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 OTORQ9NRC9 128 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 MBD2Q9UBB5 411 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 C22orf24Q9Y442 160 aa2.29□□□□□ -2.04
HERC3-213ENST00000598772 GAGE10A6NGK3 116 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 FABP5P3A8MUU1 101 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 FAM25AB3EWG3 89 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 FAM25CB3EWG5 89 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 FAM25GB3EWG6 89 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 SLC25A20O43772 301 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 CST7O76096 145 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 SPINK1P00995 79 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 ESDP10768 282 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 SLC25A6P12236 298 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 RPL29P47914 159 aaKnown RBP2.28□□□□□ -2.04
HERC3-213ENST00000598772 COTL1Q14019 142 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 C10orf25Q5T742 122 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 CD164L2Q6UWJ8 174 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 UNQ6190/PRO20217Q6UXQ8 127 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 FAM19A2Q8N3H0 131 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 TMEM229BQ8NBD8 167 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 TMEM101Q96IK0 257 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 BTF3L4Q96K17 158 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 SLC25A21Q9BQT8 299 aaPredicted RBP2.28□□□□□ -2.04
HERC3-213ENST00000598772 S100A14Q9HCY8 104 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 ALG5Q9Y673 324 aa2.28□□□□□ -2.04
HERC3-213ENST00000598772 PIGBOS1A0A0B4J2F0 54 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 KRBOX1C9JBD0 128 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 K7EQM0 130 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 L7N2F9 121 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 TCRAP04437 139 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 NTF3P20783 257 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 TMBIM6P55061 237 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 VAMP2P63027 116 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 LINC00469Q8N7U9 141 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 SCGB3A2Q96PL1 93 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 GGACTQ9BVM4 153 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 ZNF471Q9BX82 626 aaPredicted RBP2.27□□□□□ -2.05
HERC3-213ENST00000598772 MCUBQ9NWR8 336 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 GSKIPQ9P0R6 139 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 EXTL2Q9UBQ6 330 aa2.27□□□□□ -2.05
HERC3-213ENST00000598772 TRAV34A0A0B4J273 112 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 C20orf202A1L168 122 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 NDUFA1O15239 70 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 HPGDSO60760 199 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 FLI1Q01543 452 aaPredicted RBP2.26□□□□□ -2.05
HERC3-213ENST00000598772 C9orf129Q5T035 196 aaKnown RBP2.26□□□□□ -2.05
HERC3-213ENST00000598772 SPANXN1Q5VSR9 72 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 LYZL1Q6UWQ5 148 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 Q8N377 158 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 SMDT1Q9H4I9 107 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 MRPL35Q9NZE8 188 aaKnown RBP2.26□□□□□ -2.05
HERC3-213ENST00000598772 MTFP1Q9UDX5 166 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 WDR83OSQ9Y284 106 aa2.26□□□□□ -2.05
HERC3-213ENST00000598772 TGFBR1P36897 503 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 PRLHP81277 87 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 TMEM241Q24JQ0 296 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 SAPCD1Q5SSQ6 148 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 MRPL55Q7Z7F7 128 aaKnown RBP2.25□□□□□ -2.05
HERC3-213ENST00000598772 OR10AG1Q8NH19 301 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 ORAOV1Q8WV07 137 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 PRRT1Q99946 306 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 C11orf1Q9H5F2 150 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 C6orf48Q9UBA6 75 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 SCP2D1Q9UJQ7 156 aa2.25□□□□□ -2.05
HERC3-213ENST00000598772 TRAV13-1A0A0B4J241 112 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 A6NN06 94 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 M0QY20 66 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 SH2D1AO60880 128 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 IGLV6-57P01721 117 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 APOA1P02647 267 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 AKAIN1P0CW23 69 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 RPS19P39019 145 aaKnown RBP2.24□□□□□ -2.05
HERC3-213ENST00000598772 CTRLP40313 264 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 DEFA1P59665 94 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 LSM3P62310 102 aaKnown RBP2.24□□□□□ -2.05
HERC3-213ENST00000598772 SUMO4Q6EEV6 95 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 FAM19A1Q7Z5A9 133 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 PACRGLQ8N7B6 248 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 THAP6Q8TBB0 222 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
HERC3-213ENST00000598772 LINC00167Q96N53 147 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 XAGE1AQ9HD64 81 aa2.24□□□□□ -2.05
HERC3-213ENST00000598772 C7orf66A4D0T2 115 aa2.23□□□□□ -2.05
HERC3-213ENST00000598772 C1orf196B1AJZ1 125 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 364 ms