RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 RPL13AP40429 203 aaKnown RBP5.57□□□□□ -1.52
LINC00343-205ENST00000598229 CDC34P49427 236 aaPredicted RBP5.57□□□□□ -1.52
LINC00343-205ENST00000598229 Q86TA4 180 aa5.57□□□□□ -1.52
LINC00343-205ENST00000598229 TMSB15BA0A087X1C1 80 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 TRAV1-1A0A0B4J248 108 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 H0Y9J4 135 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 M0QY20 66 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 PEX7O00628 323 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 CXCL1P09341 107 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 RPL12P30050 165 aaKnown RBP5.56□□□□□ -1.52
LINC00343-205ENST00000598229 LRRC37A5PQ49AS3 106 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 C1orf137Q5JT78 98 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 OR10AG1Q8NH19 301 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 CHCHD10Q8WYQ3 142 aaPredicted RBP5.56□□□□□ -1.52
LINC00343-205ENST00000598229 HIST1H2BAQ96A08 127 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
LINC00343-205ENST00000598229 NKX6-2Q9C056 277 aaPredicted RBP5.56□□□□□ -1.52
LINC00343-205ENST00000598229 A0A1W2PNN7 141 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 SNAI2O43623 268 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 SIX6O95475 246 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 OR5AL1P0C617 328 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 AMTP48728 403 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 CARD19Q96LW7 228 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 SMIM3Q9BZL3 60 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 WFDC1Q9HC57 220 aa5.55□□□□□ -1.52
LINC00343-205ENST00000598229 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 LOC107984640A0A0U1RRK4 108 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 UBE2L6O14933 153 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 MBP02144 154 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 KRTAP1-4P0C5Y4 121 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 SMIM17P0DL12 118 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 SPANXN1Q5VSR9 72 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 FMC1Q96HJ9 113 aa5.54□□□□□ -1.52
LINC00343-205ENST00000598229 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
LINC00343-205ENST00000598229 LTAP01374 205 aa5.53□□□□□ -1.52
LINC00343-205ENST00000598229 PET100P0DJ07 73 aa5.53□□□□□ -1.52
LINC00343-205ENST00000598229 SERF2P84101 59 aa5.53□□□□□ -1.52
LINC00343-205ENST00000598229 PPP1R1CQ8WVI7 109 aa5.53□□□□□ -1.52
LINC00343-205ENST00000598229 CARHSP1Q9Y2V2 147 aaKnown RBP5.53□□□□□ -1.52
LINC00343-205ENST00000598229 MPC2O95563 127 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 FGF6P10767 208 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 UBE2D1P51668 147 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
LINC00343-205ENST00000598229 CT83Q5H943 113 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 AP1S3Q96PC3 154 aa5.52□□□□□ -1.53
LINC00343-205ENST00000598229 PSMG3Q9BT73 122 aaPredicted RBP5.52□□□□□ -1.53
LINC00343-205ENST00000598229 ACTR3CQ9C0K3 210 aaPredicted RBP5.52□□□□□ -1.53
LINC00343-205ENST00000598229 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 ATP6V0CP27449 155 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 NKX2-5P52952 324 aaPredicted RBP5.51□□□□□ -1.53
LINC00343-205ENST00000598229 UBE2G1P62253 170 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 COTL1Q14019 142 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 RASL11AQ6T310 242 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 TSKUQ8WUA8 353 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 ISOC2Q96AB3 205 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 TCEAL7Q9BRU2 100 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 NIT2Q9NQR4 276 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 TNFSF18Q9UNG2 199 aa5.51□□□□□ -1.53
LINC00343-205ENST00000598229 MUC21A0A140T8X8 626 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 FAM240BA0A1B0GVZ2 78 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 FAM74A7A6NL05 159 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 H7C423 109 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 H2BFSP57053 126 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 EIF5AP63241 154 aaKnown RBP5.5□□□□□ -1.53
LINC00343-205ENST00000598229 SUMO4Q6EEV6 95 aa5.5□□□□□ -1.53
LINC00343-205ENST00000598229 A0A087WZ39 114 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 CCDC160A6NGH7 325 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 APOMO95445 188 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 CAMPP49913 170 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 C21orf62-AS1Q17RA5 79 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 AMMECR1LQ6DCA0 310 aa5.49□□□□□ -1.53
LINC00343-205ENST00000598229 PHF5AQ7RTV0 110 aaKnown RBP5.49□□□□□ -1.53
LINC00343-205ENST00000598229 IGLV4-69A0A075B6H9 119 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 TSPAN13O95857 204 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 S100A9P06702 114 aaKnown RBP5.48□□□□□ -1.53
LINC00343-205ENST00000598229 XCL1P47992 114 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 FHITP49789 147 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 UBE2G2P60604 165 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 LCE1AQ5T7P2 110 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 NUP35Q8NFH5 326 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 OR5A1Q8NGJ0 315 aa5.48□□□□□ -1.53
LINC00343-205ENST00000598229 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 CCL25O15444 150 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 MGPP08493 103 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 SSTP61278 116 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 MZT2BQ6NZ67 158 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 CD164L2Q6UWJ8 174 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
LINC00343-205ENST00000598229 CCDC32Q9BV29 185 aa5.47□□□□□ -1.53
LINC00343-205ENST00000598229 CTXND1A0A1B0GTU2 59 aa5.46□□□□□ -1.54
LINC00343-205ENST00000598229 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.46□□□□□ -1.54
LINC00343-205ENST00000598229 NCR2O95944 276 aa5.46□□□□□ -1.54
LINC00343-205ENST00000598229 BCL2P10415 239 aa5.46□□□□□ -1.54
LINC00343-205ENST00000598229 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
LINC00343-205ENST00000598229 NTF3P20783 257 aa5.46□□□□□ -1.54
LINC00343-205ENST00000598229 LINC01547P58512 204 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms