RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 PHOX2AO14813 284 aa13.7□□□□□ -0.22
PNKP-211ENST00000598020 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
PNKP-211ENST00000598020 NFE4Q86UQ8 179 aa13.7□□□□□ -0.22
PNKP-211ENST00000598020 C20orf78Q9BR46 151 aa13.7□□□□□ -0.22
PNKP-211ENST00000598020 D6R8Y8 96 aa13.69□□□□□ -0.22
PNKP-211ENST00000598020 TMEM262E9PQX1 116 aa13.69□□□□□ -0.22
PNKP-211ENST00000598020 PMCHP20382 165 aa13.69□□□□□ -0.22
PNKP-211ENST00000598020 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
PNKP-211ENST00000598020 Q6ZRN7 208 aaPredicted RBP13.69□□□□□ -0.22
PNKP-211ENST00000598020 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
PNKP-211ENST00000598020 DNAH17Q9UFH2 4485 aa13.69□□□□□ -0.22
PNKP-211ENST00000598020 VCYO14598 125 aa13.68□□□□□ -0.22
PNKP-211ENST00000598020 AMTP48728 403 aa13.68□□□□□ -0.22
PNKP-211ENST00000598020 ELOBQ15370 118 aa13.68□□□□□ -0.22
PNKP-211ENST00000598020 TMEM136Q6ZRR5 245 aa13.68□□□□□ -0.22
PNKP-211ENST00000598020 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
PNKP-211ENST00000598020 FRAS1Q86XX4 4008 aa13.67□□□□□ -0.22
PNKP-211ENST00000598020 TNFRSF6BO95407 300 aa13.67□□□□□ -0.22
PNKP-211ENST00000598020 ATRAIDQ6UW56 229 aa13.67□□□□□ -0.22
PNKP-211ENST00000598020 PRSS29PA6NIE9 313 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 TSHBP01222 138 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 APCSP02743 223 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 GAGE6Q13070 117 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 COX19Q49B96 90 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 LAMTOR2Q9Y2Q5 125 aa13.66□□□□□ -0.22
PNKP-211ENST00000598020 A0A1B0GUV1 79 aa13.65□□□□□ -0.22
PNKP-211ENST00000598020 H7C423 109 aa13.65□□□□□ -0.22
PNKP-211ENST00000598020 DEFB104AQ8WTQ1 72 aa13.65□□□□□ -0.22
PNKP-211ENST00000598020 GNB1LQ9BYB4 327 aa13.65□□□□□ -0.22
PNKP-211ENST00000598020 TRAV8-3A0A0A6YYJ7 113 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 NPYP01303 97 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 HLA-DQA1P01909 254 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 ESDP10768 282 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 RBX1P62877 108 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 PRELID3AQ96N28 172 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
PNKP-211ENST00000598020 FAT2Q9NYQ8 4349 aa13.63□□□□□ -0.23
PNKP-211ENST00000598020 PRSS47A8MTI9 375 aa13.63□□□□□ -0.23
PNKP-211ENST00000598020 Q8N976 141 aa13.63□□□□□ -0.23
PNKP-211ENST00000598020 UBE2L6O14933 153 aa13.62□□□□□ -0.23
PNKP-211ENST00000598020 KIR2DL4Q99706 377 aa13.62□□□□□ -0.23
PNKP-211ENST00000598020 SMIM2Q9BVW6 85 aa13.62□□□□□ -0.23
PNKP-211ENST00000598020 TCAPO15273 167 aa13.61□□□□□ -0.23
PNKP-211ENST00000598020 TNP2Q05952 138 aa13.61□□□□□ -0.23
PNKP-211ENST00000598020 Q0VG73 95 aa13.61□□□□□ -0.23
PNKP-211ENST00000598020 A0A1B0GVY2 172 aa13.6□□□□□ -0.23
PNKP-211ENST00000598020 MT-ND6P03923 174 aa13.6□□□□□ -0.23
PNKP-211ENST00000598020 ANGP03950 147 aaKnown RBP13.6□□□□□ -0.23
PNKP-211ENST00000598020 Q9HAA7 133 aa13.6□□□□□ -0.23
PNKP-211ENST00000598020 PRR34Q9NV39 138 aa13.6□□□□□ -0.23
PNKP-211ENST00000598020 FCER1GP30273 86 aa13.59□□□□□ -0.23
PNKP-211ENST00000598020 C20orf203Q8NBC4 194 aa13.59□□□□□ -0.23
PNKP-211ENST00000598020 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
PNKP-211ENST00000598020 TM2D2Q9BX73 214 aa13.59□□□□□ -0.23
PNKP-211ENST00000598020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.58□□□□□ -0.24
PNKP-211ENST00000598020 TGIF2-C20orf24A0A0A6YYL0 155 aa13.58□□□□□ -0.24
PNKP-211ENST00000598020 IGKV2-29A2NJV5 120 aaPredicted RBP13.58□□□□□ -0.24
PNKP-211ENST00000598020 ENHOQ6UWT2 76 aa13.58□□□□□ -0.24
PNKP-211ENST00000598020 RMI2Q96E14 147 aa13.58□□□□□ -0.24
PNKP-211ENST00000598020 COX11Q9Y6N1 276 aa13.58□□□□□ -0.24
PNKP-211ENST00000598020 IGLV4-60A0A075B6I1 120 aa13.57□□□□□ -0.24
PNKP-211ENST00000598020 FGF6P10767 208 aa13.57□□□□□ -0.24
PNKP-211ENST00000598020 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
PNKP-211ENST00000598020 YPEL4Q96NS1 127 aa13.57□□□□□ -0.24
PNKP-211ENST00000598020 CRPP02741 224 aa13.56□□□□□ -0.24
PNKP-211ENST00000598020 MIAQ16674 131 aa13.56□□□□□ -0.24
PNKP-211ENST00000598020 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
PNKP-211ENST00000598020 MRPL52Q86TS9 123 aaKnown RBP13.56□□□□□ -0.24
PNKP-211ENST00000598020 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
PNKP-211ENST00000598020 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
PNKP-211ENST00000598020 LINC00269Q8N2A0 174 aa13.55□□□□□ -0.24
PNKP-211ENST00000598020 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
PNKP-211ENST00000598020 EPPK1P58107 5090 aaKnown RBP13.54□□□□□ -0.24
PNKP-211ENST00000598020 Q8N8P6 123 aa13.54□□□□□ -0.24
PNKP-211ENST00000598020 MRPL18Q9H0U6 180 aaKnown RBP13.54□□□□□ -0.24
PNKP-211ENST00000598020 PSCAO43653 123 aa13.53□□□□□ -0.24
PNKP-211ENST00000598020 REG3AQ06141 175 aa13.53□□□□□ -0.24
PNKP-211ENST00000598020 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
PNKP-211ENST00000598020 TMEM18Q96B42 140 aa13.53□□□□□ -0.24
PNKP-211ENST00000598020 K7EMI3 77 aa13.52□□□□□ -0.25
PNKP-211ENST00000598020 SMAGPQ0VAQ4 97 aa13.52□□□□□ -0.25
PNKP-211ENST00000598020 FABP9Q0Z7S8 132 aa13.52□□□□□ -0.25
PNKP-211ENST00000598020 ALKBH7Q9BT30 221 aaPredicted RBP13.52□□□□□ -0.25
PNKP-211ENST00000598020 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.25
PNKP-211ENST00000598020 CSDC2Q9Y534 153 aaKnown RBP13.52□□□□□ -0.25
PNKP-211ENST00000598020 IGKV2D-24A0A075B6R9 120 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 A0A087WTM6 91 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 LOC389332A0A1B0GUA5 103 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 LRCOL1A6NCL2 159 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 RAB5AP20339 215 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 CBLN2Q8IUK8 224 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 TMEM101Q96IK0 257 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 NXT2Q9NPJ8 142 aaKnown RBP13.51□□□□□ -0.25
PNKP-211ENST00000598020 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
PNKP-211ENST00000598020 TRAV8-4A0A0B4J246 113 aa13.5□□□□□ -0.25
PNKP-211ENST00000598020 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
PNKP-211ENST00000598020 UBE2D4Q9Y2X8 147 aa13.5□□□□□ -0.25
PNKP-211ENST00000598020 EREGO14944 169 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms