RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
IRF3-219ENST00000597636 ZANQ9Y493 2812 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 ZNF843Q8N446 348 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 SPANXA1Q9NS26 97 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 CCDC168Q8NDH2 2452 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 COX6CP09669 75 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
IRF3-219ENST00000597636 ID1P41134 155 aa11.46□□□□□ -0.57
IRF3-219ENST00000597636 DAZ1Q9NQZ3 744 aaKnown RBP11.46□□□□□ -0.57
IRF3-219ENST00000597636 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
IRF3-219ENST00000597636 LMO4P61968 165 aa11.46□□□□□ -0.57
IRF3-219ENST00000597636 TENM4Q6N022 2769 aa11.46□□□□□ -0.57
IRF3-219ENST00000597636 SPANXDQ9BXN6 97 aa11.46□□□□□ -0.57
IRF3-219ENST00000597636 SPANXCQ9NY87 97 aa11.46□□□□□ -0.57
IRF3-219ENST00000597636 FAM240AA0A1B0GVK7 77 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 BRI3O95415 125 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
IRF3-219ENST00000597636 DCANP1Q8TF63 244 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 CSPG4Q6UVK1 2322 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 ANKRD17O75179 2603 aaKnown RBP11.45□□□□□ -0.58
IRF3-219ENST00000597636 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
IRF3-219ENST00000597636 UBR5O95071 2799 aaPredicted RBP11.44□□□□□ -0.58
IRF3-219ENST00000597636 H3BUA1 57 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 IGHV1-58A0A0C4DH39 117 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 PF4V1P10720 104 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 MIAQ16674 131 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 CLEC2BQ92478 149 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 TLN2Q9Y4G6 2542 aa11.44□□□□□ -0.58
IRF3-219ENST00000597636 TRAV12-2A0A075B6T6 113 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 LST1O00453 97 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 CD28P10747 220 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 EDN2P20800 178 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 DUX3Q96PT4 197 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 Q6ZSV7 163 aa11.43□□□□□ -0.58
IRF3-219ENST00000597636 NAV2Q8IVL1 2488 aa11.42□□□□□ -0.58
IRF3-219ENST00000597636 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
IRF3-219ENST00000597636 BPESC1Q9GZL8 116 aa11.42□□□□□ -0.58
IRF3-219ENST00000597636 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
IRF3-219ENST00000597636 IGKV3-20P01619 116 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 IGHG2P01859 326 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 HERV-K104P63124 156 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 TMEM61Q8N0U2 210 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
IRF3-219ENST00000597636 NOTCH2Q04721 2471 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 NPC2P61916 151 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 VSIG2Q96IQ7 327 aa11.41□□□□□ -0.58
IRF3-219ENST00000597636 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
IRF3-219ENST00000597636 K7EMT4 169 aa11.4□□□□□ -0.58
IRF3-219ENST00000597636 TRBV7-7A0A0K0K1E9 115 aa11.4□□□□□ -0.58
IRF3-219ENST00000597636 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
IRF3-219ENST00000597636 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
IRF3-219ENST00000597636 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
IRF3-219ENST00000597636 LY6EQ16553 131 aa11.39□□□□□ -0.59
IRF3-219ENST00000597636 YAE1D1Q9NRH1 226 aa11.39□□□□□ -0.59
IRF3-219ENST00000597636 A8MZ25 164 aa11.38□□□□□ -0.59
IRF3-219ENST00000597636 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
IRF3-219ENST00000597636 TINCRA0A1B0GVN0 87 aa11.38□□□□□ -0.59
IRF3-219ENST00000597636 RNASE13Q5GAN3 156 aaKnown RBP11.38□□□□□ -0.59
IRF3-219ENST00000597636 HIST2H2BCQ6DN03 193 aa11.38□□□□□ -0.59
IRF3-219ENST00000597636 SPINK13Q1W4C9 94 aa11.37□□□□□ -0.59
IRF3-219ENST00000597636 IGLV1-40P01703 118 aa11.37□□□□□ -0.59
IRF3-219ENST00000597636 BLCAPP62952 87 aa11.36□□□□□ -0.59
IRF3-219ENST00000597636 TIMM17BO60830 172 aa11.36□□□□□ -0.59
IRF3-219ENST00000597636 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
IRF3-219ENST00000597636 HECTD1Q9ULT8 2610 aa11.35□□□□□ -0.59
IRF3-219ENST00000597636 TMEM101Q96IK0 257 aa11.35□□□□□ -0.59
IRF3-219ENST00000597636 ZNF469Q96JG9 3925 aaPredicted RBP11.35□□□□□ -0.59
IRF3-219ENST00000597636 SNRPD3P62318 126 aaKnown RBP11.35□□□□□ -0.59
IRF3-219ENST00000597636 APCP25054 2843 aa11.35□□□□□ -0.59
IRF3-219ENST00000597636 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 CFAP161Q6P656 301 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 ITPR2Q14571 2701 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 A6NDX4 124 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 ACYP1P07311 99 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 PROK1P58294 105 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 DAND5Q8N907 189 aa11.34□□□□□ -0.59
IRF3-219ENST00000597636 SONP18583 2426 aaKnown RBP11.33□□□□□ -0.6
IRF3-219ENST00000597636 H3BUX3 64 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 LINC01587Q99440 93 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
IRF3-219ENST00000597636 IMUPQ9GZP8 106 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 GCN1Q92616 2671 aaKnown RBP11.33□□□□□ -0.6
IRF3-219ENST00000597636 KMT2BQ9UMN6 2715 aaPredicted RBP11.33□□□□□ -0.6
IRF3-219ENST00000597636 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 ABCA2Q9BZC7 2435 aa11.33□□□□□ -0.6
IRF3-219ENST00000597636 K7EQG2 157 aa11.32□□□□□ -0.6
IRF3-219ENST00000597636 CCL19Q99731 98 aa11.32□□□□□ -0.6
IRF3-219ENST00000597636 CHCHD7Q9BUK0 85 aa11.32□□□□□ -0.6
IRF3-219ENST00000597636 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
IRF3-219ENST00000597636 FAM236AA0A1B0GUQ0 79 aa11.31□□□□□ -0.6
IRF3-219ENST00000597636 FAM236BA0A1B0GV22 79 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms