RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 NTF3P20783 257 aa10.09□□□□□ -0.79
TGFB1-202ENST00000597453 RPL36AP83881 106 aaKnown RBP10.09□□□□□ -0.79
TGFB1-202ENST00000597453 ADIRFQ15847 76 aa10.09□□□□□ -0.79
TGFB1-202ENST00000597453 NTN5Q8WTR8 489 aaPredicted RBP10.09□□□□□ -0.79
TGFB1-202ENST00000597453 RPL36ALQ969Q0 106 aaKnown RBP10.09□□□□□ -0.79
TGFB1-202ENST00000597453 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
TGFB1-202ENST00000597453 TRBV7-3A0A075B6L6 115 aa10.08□□□□□ -0.8
TGFB1-202ENST00000597453 F5H697 171 aa10.08□□□□□ -0.8
TGFB1-202ENST00000597453 WFDC2Q14508 124 aa10.08□□□□□ -0.8
TGFB1-202ENST00000597453 OR10G8Q8NGN5 311 aa10.08□□□□□ -0.8
TGFB1-202ENST00000597453 PHOX2AO14813 284 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 MGPP08493 103 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 FOXA3P55318 350 aaPredicted RBP10.07□□□□□ -0.8
TGFB1-202ENST00000597453 UBE2D3P61077 147 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 UBE2D2P62837 147 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 LAGE3Q14657 143 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 TWIST1Q15672 202 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 NEXN-AS1Q8NBZ9 246 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 GFRA4Q9GZZ7 299 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 DPH3P1Q9H4G8 78 aa10.07□□□□□ -0.8
TGFB1-202ENST00000597453 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 FAM231BA6NCW3 169 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
TGFB1-202ENST00000597453 KCNIP4Q6PIL6 250 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 TMEM70Q9BUB7 260 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 URGCP-MRPS24S4R325 110 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 V9GYV3 84 aa10.06□□□□□ -0.8
TGFB1-202ENST00000597453 COA6Q5JTJ3 125 aaKnown RBP10.05□□□□□ -0.8
TGFB1-202ENST00000597453 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
TGFB1-202ENST00000597453 DAZ4Q86SG3 579 aaKnown RBP10.05□□□□□ -0.8
TGFB1-202ENST00000597453 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
TGFB1-202ENST00000597453 DAZ3Q9NR90 486 aaKnown RBP10.05□□□□□ -0.8
TGFB1-202ENST00000597453 FAM30AQ9NZY2 134 aa10.05□□□□□ -0.8
TGFB1-202ENST00000597453 HIGD1CA8MV81 97 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 H7C1H1 209 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 M0QY20 66 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 TRGC2P03986 189 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 S100A2P29034 98 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 TM2D2Q9BX73 214 aa10.04□□□□□ -0.8
TGFB1-202ENST00000597453 LECT2O14960 151 aa10.03□□□□□ -0.8
TGFB1-202ENST00000597453 NDUFA6P56556 154 aa10.03□□□□□ -0.8
TGFB1-202ENST00000597453 SMIM15Q7Z3B0 74 aa10.03□□□□□ -0.8
TGFB1-202ENST00000597453 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
TGFB1-202ENST00000597453 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
TGFB1-202ENST00000597453 HIST3H2BBQ8N257 126 aa10.02□□□□□ -0.81
TGFB1-202ENST00000597453 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
TGFB1-202ENST00000597453 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
TGFB1-202ENST00000597453 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
TGFB1-202ENST00000597453 CTAG1AP78358 180 aa10.01□□□□□ -0.81
TGFB1-202ENST00000597453 IFITM10A6NMD0 228 aa10□□□□□ -0.81
TGFB1-202ENST00000597453 NIT1Q86X76 327 aa10□□□□□ -0.81
TGFB1-202ENST00000597453 NAT8BQ9UHF3 227 aa10□□□□□ -0.81
TGFB1-202ENST00000597453 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
TGFB1-202ENST00000597453 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 PCP4L1A6NKN8 68 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 TMEM97Q5BJF2 176 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 NUP35Q8NFH5 326 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 NIT2Q9NQR4 276 aa9.99□□□□□ -0.81
TGFB1-202ENST00000597453 RIGQ13278 110 aa9.98□□□□□ -0.81
TGFB1-202ENST00000597453 Q6ZSA8 131 aa9.98□□□□□ -0.81
TGFB1-202ENST00000597453 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
TGFB1-202ENST00000597453 CHCHD7Q9BUK0 85 aa9.98□□□□□ -0.81
TGFB1-202ENST00000597453 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
TGFB1-202ENST00000597453 COX19Q49B96 90 aa9.97□□□□□ -0.81
TGFB1-202ENST00000597453 LINC01620Q4KN68 170 aa9.97□□□□□ -0.81
TGFB1-202ENST00000597453 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
TGFB1-202ENST00000597453 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
TGFB1-202ENST00000597453 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
TGFB1-202ENST00000597453 IGKV2D-24A0A075B6R9 120 aa9.95□□□□□ -0.82
TGFB1-202ENST00000597453 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
TGFB1-202ENST00000597453 UBE2WQ96B02 151 aa9.95□□□□□ -0.82
TGFB1-202ENST00000597453 COX11Q9Y6N1 276 aa9.95□□□□□ -0.82
TGFB1-202ENST00000597453 TRBV25-1A0A075B6N4 114 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 A0A087WX48 190 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 PKIAP61925 76 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 IQCJQ1A5X6 159 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 OR10D4PQ8NGN7 298 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 RMI2Q96E14 147 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 HIST1H2BLQ99880 126 aa9.94□□□□□ -0.82
TGFB1-202ENST00000597453 IGHV1-24A0A0C4DH33 117 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 A0A1B0GW15 77 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 RAB4AP20338 218 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 AMN1Q8IY45 258 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
TGFB1-202ENST00000597453 RPL39LQ96EH5 51 aaKnown RBP9.93□□□□□ -0.82
TGFB1-202ENST00000597453 MRAP2Q96G30 205 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms