RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 SMIM2Q9BVW6 85 aa9.36□□□□□ -0.91
PRKD2-208ENST00000597390 I3L3M4 83 aa9.35□□□□□ -0.91
PRKD2-208ENST00000597390 VCYO14598 125 aa9.35□□□□□ -0.91
PRKD2-208ENST00000597390 TSHBP01222 138 aa9.35□□□□□ -0.91
PRKD2-208ENST00000597390 DEFB104AQ8WTQ1 72 aa9.35□□□□□ -0.91
PRKD2-208ENST00000597390 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 CCL18P55774 89 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 LELP1Q5T871 98 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 LINC00336Q6ZUF6 198 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
PRKD2-208ENST00000597390 MRPS16Q9Y3D3 137 aaKnown RBP9.34□□□□□ -0.91
PRKD2-208ENST00000597390 LOC389332A0A1B0GUA5 103 aa9.33□□□□□ -0.92
PRKD2-208ENST00000597390 PMCHP20382 165 aa9.33□□□□□ -0.92
PRKD2-208ENST00000597390 IQCJQ1A5X6 159 aa9.33□□□□□ -0.92
PRKD2-208ENST00000597390 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
PRKD2-208ENST00000597390 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
PRKD2-208ENST00000597390 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
PRKD2-208ENST00000597390 M0R2N4 97 aa9.32□□□□□ -0.92
PRKD2-208ENST00000597390 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
PRKD2-208ENST00000597390 COTL1Q14019 142 aa9.32□□□□□ -0.92
PRKD2-208ENST00000597390 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
PRKD2-208ENST00000597390 Q8N8P6 123 aa9.32□□□□□ -0.92
PRKD2-208ENST00000597390 UPK3BQ9BT76 320 aa9.32□□□□□ -0.92
PRKD2-208ENST00000597390 ESDP10768 282 aa9.31□□□□□ -0.92
PRKD2-208ENST00000597390 KIR2DL4Q99706 377 aa9.31□□□□□ -0.92
PRKD2-208ENST00000597390 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 TCAPO15273 167 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 WFDC10BQ8IUB3 73 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 CHCHD7Q9BUK0 85 aa9.3□□□□□ -0.92
PRKD2-208ENST00000597390 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
PRKD2-208ENST00000597390 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
PRKD2-208ENST00000597390 AMTP48728 403 aa9.29□□□□□ -0.92
PRKD2-208ENST00000597390 Q6ZR54 194 aa9.29□□□□□ -0.92
PRKD2-208ENST00000597390 RTL8CO15255 209 aa9.28□□□□□ -0.92
PRKD2-208ENST00000597390 FCER1GP30273 86 aa9.28□□□□□ -0.92
PRKD2-208ENST00000597390 PRSS3P2Q8NHM4 247 aa9.28□□□□□ -0.92
PRKD2-208ENST00000597390 TMEM243Q9BU79 118 aa9.28□□□□□ -0.92
PRKD2-208ENST00000597390 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
PRKD2-208ENST00000597390 TRAV8-6A0A0B4J262 113 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 K7EMI3 77 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BKO60814 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BJP06899 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BOP23527 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BBP33778 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BDP58876 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BCP62807 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 Q0VG73 95 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST2H2BEQ16778 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.27□□□□□ -0.93
PRKD2-208ENST00000597390 NIT1Q86X76 327 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 Q8N3U1 123 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BHQ93079 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BNQ99877 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 HIST1H2BMQ99879 126 aa9.27□□□□□ -0.93
PRKD2-208ENST00000597390 PRSS29PA6NIE9 313 aa9.26□□□□□ -0.93
PRKD2-208ENST00000597390 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
PRKD2-208ENST00000597390 C20orf203Q8NBC4 194 aa9.26□□□□□ -0.93
PRKD2-208ENST00000597390 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
PRKD2-208ENST00000597390 Q9H8V8 135 aa9.26□□□□□ -0.93
PRKD2-208ENST00000597390 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
PRKD2-208ENST00000597390 A0A1B0GVY2 172 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
PRKD2-208ENST00000597390 SIVA1O15304 175 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 LINC00614P0C842 121 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 BTF3P20290 206 aaKnown RBP9.25□□□□□ -0.93
PRKD2-208ENST00000597390 LINC00310P59036 64 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 LAGE3Q14657 143 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 PKD1P98161 4303 aa9.25□□□□□ -0.93
PRKD2-208ENST00000597390 H7C423 109 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 GAGE6Q13070 117 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 ORMDL2Q53FV1 153 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 LINC01556Q5JQF7 62 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 FA2HQ7L5A8 372 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 PKHD1P08F94 4074 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 C1orf196B1AJZ1 125 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 K7EP13 123 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 RPL39P62891 51 aaKnown RBP9.24□□□□□ -0.93
PRKD2-208ENST00000597390 MPV17L2Q567V2 206 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 C1orf134Q5TEV5 83 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
PRKD2-208ENST00000597390 A0A096LNJ9 63 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 NBDYA0A0U1RRE5 68 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 TMEM262E9PQX1 116 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 FGF6P10767 208 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 RAB5BP61020 215 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 RBX1P62877 108 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 TTC32Q5I0X7 151 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
PRKD2-208ENST00000597390 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
PRKD2-208ENST00000597390 BAGE3Q86Y29 109 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 Q8N976 141 aa9.23□□□□□ -0.93
PRKD2-208ENST00000597390 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
PRKD2-208ENST00000597390 IGLV4-60A0A075B6I1 120 aa9.22□□□□□ -0.93
PRKD2-208ENST00000597390 A0A1B0GUV1 79 aa9.22□□□□□ -0.93
PRKD2-208ENST00000597390 UBE2L6O14933 153 aa9.22□□□□□ -0.93
PRKD2-208ENST00000597390 NUPR1O60356 82 aa9.22□□□□□ -0.93
PRKD2-208ENST00000597390 SERF1AO75920 110 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms