RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 RNF185Q96GF1 192 aa8.7□□□□□ -1.02
IRF3-218ENST00000597369 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
IRF3-218ENST00000597369 AP1S3Q96PC3 154 aa8.7□□□□□ -1.02
IRF3-218ENST00000597369 LINC01587Q99440 93 aa8.7□□□□□ -1.02
IRF3-218ENST00000597369 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
IRF3-218ENST00000597369 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
IRF3-218ENST00000597369 LRCOL1A6NCL2 159 aa8.69□□□□□ -1.02
IRF3-218ENST00000597369 EVI2AP22794 236 aa8.69□□□□□ -1.02
IRF3-218ENST00000597369 PRELID3AQ96N28 172 aa8.69□□□□□ -1.02
IRF3-218ENST00000597369 A0A096LPF7 62 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 NUPR1O60356 82 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 GAS8-AS1O95177 125 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 LINC00310P59036 64 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 ZNF415Q09FC8 603 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 OR10D4PQ8NGN7 298 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 PACRGQ96M98 296 aaPredicted RBP8.68□□□□□ -1.02
IRF3-218ENST00000597369 SAMD10Q9BYL1 202 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
IRF3-218ENST00000597369 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 HTN1P15515 57 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 RNASEKQ6P5S7 137 aaKnown RBP8.67□□□□□ -1.02
IRF3-218ENST00000597369 NIT1Q86X76 327 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 LINC00612Q8N6U2 182 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 Q8N814 137 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 CHCHD1Q96BP2 118 aaKnown RBP8.67□□□□□ -1.02
IRF3-218ENST00000597369 MRAP2Q96G30 205 aa8.67□□□□□ -1.02
IRF3-218ENST00000597369 MUC2Q02817 5179 aa8.66□□□□□ -1.02
IRF3-218ENST00000597369 SMKR1H3BMG3 65 aa8.66□□□□□ -1.02
IRF3-218ENST00000597369 HSBP1O75506 76 aa8.66□□□□□ -1.02
IRF3-218ENST00000597369 NCR2O95944 276 aa8.66□□□□□ -1.02
IRF3-218ENST00000597369 C14orf178Q8N769 122 aaPredicted RBP8.66□□□□□ -1.02
IRF3-218ENST00000597369 SMIM6P0DI80 62 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 PMCHP20382 165 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 PRSS3P2Q8NHM4 247 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 C16orf74Q96GX8 76 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.02
IRF3-218ENST00000597369 M0R2P5 195 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 NPYP01303 97 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 MGPP08493 103 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 LINC00614P0C842 121 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 AMTP48728 403 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 PTH2Q96A98 100 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 SPXQ9BT56 116 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 NOP10Q9NPE3 64 aaKnown RBP8.64□□□□□ -1.03
IRF3-218ENST00000597369 GSN-AS1Q9NRJ2 163 aa8.64□□□□□ -1.03
IRF3-218ENST00000597369 TNFRSF6BO95407 300 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 PPP1R17O96001 155 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 PIK3CD-AS1Q5SR53 167 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 LINC00518Q8N0U6 118 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 URB1-AS1Q96HZ7 61 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 VSIG2Q96IQ7 327 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
IRF3-218ENST00000597369 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
IRF3-218ENST00000597369 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
IRF3-218ENST00000597369 NRACQ8N912 160 aa8.62□□□□□ -1.03
IRF3-218ENST00000597369 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
IRF3-218ENST00000597369 AP5S1Q9NUS5 200 aa8.62□□□□□ -1.03
IRF3-218ENST00000597369 A0A087WWL8 130 aa8.61□□□□□ -1.03
IRF3-218ENST00000597369 GATA1P15976 413 aaPredicted RBP8.61□□□□□ -1.03
IRF3-218ENST00000597369 IFI27P40305 119 aaPredicted RBP8.61□□□□□ -1.03
IRF3-218ENST00000597369 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
IRF3-218ENST00000597369 RNASE8Q8TDE3 154 aaKnown RBP8.61□□□□□ -1.03
IRF3-218ENST00000597369 TMEM263Q8WUH6 116 aaKnown RBP8.61□□□□□ -1.03
IRF3-218ENST00000597369 JPT2Q9H910 190 aa8.61□□□□□ -1.03
IRF3-218ENST00000597369 NXT2Q9NPJ8 142 aaKnown RBP8.61□□□□□ -1.03
IRF3-218ENST00000597369 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 PRSS47A8MTI9 375 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 A8MWV9 139 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 F5H697 171 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 PSCAO43653 123 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 HNRNPA3P51991 378 aaKnown RBP8.6□□□□□ -1.03
IRF3-218ENST00000597369 ZNF56Q15929 161 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 LELP1Q5T871 98 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 C12orf57Q99622 126 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
IRF3-218ENST00000597369 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 CRYGDP07320 174 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 S100A12P80511 92 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 JOSD1Q15040 202 aaPredicted RBP8.59□□□□□ -1.03
IRF3-218ENST00000597369 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 FAM74A4Q5TZK3 123 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 SUMO4Q6EEV6 95 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 Q8N8P6 123 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 RASL10AQ92737 203 aa8.59□□□□□ -1.03
IRF3-218ENST00000597369 RHODO00212 210 aa8.58□□□□□ -1.04
IRF3-218ENST00000597369 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
IRF3-218ENST00000597369 LPAP08519 4548 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 KRTDAPP60985 99 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 SUMO2P61956 95 aaKnown RBP8.57□□□□□ -1.04
IRF3-218ENST00000597369 DAZ2Q13117 558 aaKnown RBP8.57□□□□□ -1.04
IRF3-218ENST00000597369 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
IRF3-218ENST00000597369 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms