RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 KIF25-AS1Q9Y6Z4 181 aa9.96□□□□□ -0.82
LIG1-214ENST00000597146 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 K7EN84 100 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 ANGP03950 147 aaKnown RBP9.95□□□□□ -0.82
LIG1-214ENST00000597146 Q0VG73 95 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 C15orf54Q8N8G6 183 aa9.95□□□□□ -0.82
LIG1-214ENST00000597146 M0QY20 66 aa9.94□□□□□ -0.82
LIG1-214ENST00000597146 PGLYRP4Q96LB8 373 aa9.94□□□□□ -0.82
LIG1-214ENST00000597146 FAM210AQ96ND0 272 aa9.94□□□□□ -0.82
LIG1-214ENST00000597146 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
LIG1-214ENST00000597146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
LIG1-214ENST00000597146 IGHV1-24A0A0C4DH33 117 aa9.93□□□□□ -0.82
LIG1-214ENST00000597146 PANO1I0J062 215 aa9.93□□□□□ -0.82
LIG1-214ENST00000597146 GAGE6Q13070 117 aa9.93□□□□□ -0.82
LIG1-214ENST00000597146 CTRLP40313 264 aa9.92□□□□□ -0.82
LIG1-214ENST00000597146 PEA15Q15121 130 aa9.92□□□□□ -0.82
LIG1-214ENST00000597146 C1orf43Q9BWL3 253 aa9.92□□□□□ -0.82
LIG1-214ENST00000597146 UBE2L6O14933 153 aa9.91□□□□□ -0.82
LIG1-214ENST00000597146 SRP19P09132 144 aaKnown RBP9.91□□□□□ -0.82
LIG1-214ENST00000597146 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
LIG1-214ENST00000597146 ATRAIDQ6UW56 229 aa9.91□□□□□ -0.82
LIG1-214ENST00000597146 FAM231DQ6ZW35 169 aa9.91□□□□□ -0.82
LIG1-214ENST00000597146 MUC2Q02817 5179 aa9.9□□□□□ -0.82
LIG1-214ENST00000597146 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
LIG1-214ENST00000597146 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
LIG1-214ENST00000597146 NTM-AS1Q6ZSK4 140 aa9.9□□□□□ -0.82
LIG1-214ENST00000597146 COTL1Q14019 142 aa9.89□□□□□ -0.83
LIG1-214ENST00000597146 MPV17L2Q567V2 206 aa9.89□□□□□ -0.83
LIG1-214ENST00000597146 TEX261Q6UWH6 196 aa9.89□□□□□ -0.83
LIG1-214ENST00000597146 GTSF1Q8WW33 167 aa9.89□□□□□ -0.83
LIG1-214ENST00000597146 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
LIG1-214ENST00000597146 AMTP48728 403 aa9.88□□□□□ -0.83
LIG1-214ENST00000597146 RBX1P62877 108 aa9.88□□□□□ -0.83
LIG1-214ENST00000597146 LINC01551Q86U37 167 aa9.88□□□□□ -0.83
LIG1-214ENST00000597146 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
LIG1-214ENST00000597146 TRAV26-2A0A0B4J265 109 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 MIAQ16674 131 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 CT83Q5H943 113 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 LINC00269Q8N2A0 174 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 GATD1Q8NB37 220 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 TSKUQ8WUA8 353 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 LINC01600Q96MT4 127 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
LIG1-214ENST00000597146 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 PMCHP20382 165 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
LIG1-214ENST00000597146 RIGQ13278 110 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 ADIRFQ15847 76 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 CLPSL2Q6UWE3 100 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
LIG1-214ENST00000597146 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 HLA-DQA1P01909 254 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 RAB14P61106 215 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 GFRA4Q9GZZ7 299 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 NAT8Q9UHE5 227 aa9.85□□□□□ -0.83
LIG1-214ENST00000597146 FAM231BA6NCW3 169 aa9.84□□□□□ -0.83
LIG1-214ENST00000597146 SMDT1Q9H4I9 107 aa9.84□□□□□ -0.83
LIG1-214ENST00000597146 REG3AQ06141 175 aa9.83□□□□□ -0.84
LIG1-214ENST00000597146 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
LIG1-214ENST00000597146 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
LIG1-214ENST00000597146 RPL23P62829 140 aaKnown RBP9.82□□□□□ -0.84
LIG1-214ENST00000597146 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
LIG1-214ENST00000597146 ISOC2Q96AB3 205 aa9.82□□□□□ -0.84
LIG1-214ENST00000597146 ST20Q9HBF5 79 aa9.82□□□□□ -0.84
LIG1-214ENST00000597146 NAT8BQ9UHF3 227 aa9.82□□□□□ -0.84
LIG1-214ENST00000597146 IGLV10-54A0A075B6I4 117 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 I3L3M4 83 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 NCR2O95944 276 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 APCSP02743 223 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 PRSS1P07477 247 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 C9orf163Q8N9P6 203 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 TMEM191AQ9H0A3 160 aa9.81□□□□□ -0.84
LIG1-214ENST00000597146 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 IGKV3OR2-268A0A0C4DH90 116 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 SRSF3P84103 164 aaKnown RBP9.8□□□□□ -0.84
LIG1-214ENST00000597146 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 BTF3L4Q96K17 158 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 V9GYV3 84 aa9.8□□□□□ -0.84
LIG1-214ENST00000597146 C9JQL5 133 aa9.79□□□□□ -0.84
LIG1-214ENST00000597146 PHOX2AO14813 284 aa9.79□□□□□ -0.84
LIG1-214ENST00000597146 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
LIG1-214ENST00000597146 MRAP2Q96G30 205 aa9.79□□□□□ -0.84
LIG1-214ENST00000597146 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
LIG1-214ENST00000597146 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 PPP1R17O96001 155 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 RAB4AP20338 218 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 CAMPP49913 170 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
LIG1-214ENST00000597146 C20orf203Q8NBC4 194 aa9.78□□□□□ -0.84
LIG1-214ENST00000597146 H7C423 109 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms