RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 TCTAP57738 103 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 LINC00310P59036 64 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 ESRGQ1W209 222 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 RNASEKQ6P5S7 137 aaKnown RBP14.37□□□□□ -0.11
IRF3-214ENST00000596788 FA2HQ7L5A8 372 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 NIT1Q86X76 327 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 BAGE3Q86Y29 109 aa14.37□□□□□ -0.11
IRF3-214ENST00000596788 TRBV6-8A0A0A6YYG3 113 aa14.36□□□□□ -0.11
IRF3-214ENST00000596788 LINC01546A6NGU7 62 aa14.36□□□□□ -0.11
IRF3-214ENST00000596788 TMEM97Q5BJF2 176 aa14.36□□□□□ -0.11
IRF3-214ENST00000596788 C3orf84H3BNL1 204 aa14.35□□□□□ -0.11
IRF3-214ENST00000596788 AMTP48728 403 aa14.35□□□□□ -0.11
IRF3-214ENST00000596788 CASC10Q5T4H9 136 aa14.35□□□□□ -0.11
IRF3-214ENST00000596788 CHCHD7Q9BUK0 85 aa14.35□□□□□ -0.11
IRF3-214ENST00000596788 IGHV1-24A0A0C4DH33 117 aa14.34□□□□□ -0.11
IRF3-214ENST00000596788 SERF1AO75920 110 aa14.34□□□□□ -0.11
IRF3-214ENST00000596788 LINC00614P0C842 121 aa14.34□□□□□ -0.11
IRF3-214ENST00000596788 LELP1Q5T871 98 aa14.34□□□□□ -0.11
IRF3-214ENST00000596788 TRBV25-1A0A075B6N4 114 aa14.33□□□□□ -0.12
IRF3-214ENST00000596788 K7EMI3 77 aa14.33□□□□□ -0.12
IRF3-214ENST00000596788 ESDP10768 282 aa14.33□□□□□ -0.12
IRF3-214ENST00000596788 LAGE3Q14657 143 aa14.33□□□□□ -0.12
IRF3-214ENST00000596788 AP5S1Q9NUS5 200 aa14.33□□□□□ -0.12
IRF3-214ENST00000596788 PLECQ15149 4684 aaKnown RBP14.33□□□□□ -0.12
IRF3-214ENST00000596788 CHCHD1Q96BP2 118 aaKnown RBP14.32□□□□□ -0.12
IRF3-214ENST00000596788 TMEM243Q9BU79 118 aa14.32□□□□□ -0.12
IRF3-214ENST00000596788 LINC00588Q9Y4M8 146 aa14.32□□□□□ -0.12
IRF3-214ENST00000596788 NUPR1O60356 82 aa14.31□□□□□ -0.12
IRF3-214ENST00000596788 NDUFA6P56556 154 aa14.31□□□□□ -0.12
IRF3-214ENST00000596788 ORMDL2Q53FV1 153 aa14.31□□□□□ -0.12
IRF3-214ENST00000596788 MRPS16Q9Y3D3 137 aaKnown RBP14.31□□□□□ -0.12
IRF3-214ENST00000596788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
IRF3-214ENST00000596788 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
IRF3-214ENST00000596788 CCL18P55774 89 aa14.3□□□□□ -0.12
IRF3-214ENST00000596788 COA6Q5JTJ3 125 aaKnown RBP14.3□□□□□ -0.12
IRF3-214ENST00000596788 PMCHL1Q16048 86 aa14.29□□□□□ -0.12
IRF3-214ENST00000596788 C20orf203Q8NBC4 194 aa14.29□□□□□ -0.12
IRF3-214ENST00000596788 CHCHD5Q9BSY4 110 aa14.29□□□□□ -0.12
IRF3-214ENST00000596788 A0A096LNJ9 63 aa14.28□□□□□ -0.12
IRF3-214ENST00000596788 RPL39P62891 51 aaKnown RBP14.28□□□□□ -0.12
IRF3-214ENST00000596788 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
IRF3-214ENST00000596788 TRAV8-6A0A0B4J262 113 aa14.27□□□□□ -0.13
IRF3-214ENST00000596788 HSBP1O75506 76 aa14.27□□□□□ -0.13
IRF3-214ENST00000596788 GAGE6Q13070 117 aa14.27□□□□□ -0.13
IRF3-214ENST00000596788 TMA7Q9Y2S6 64 aaKnown RBP14.27□□□□□ -0.13
IRF3-214ENST00000596788 BTF3P20290 206 aaKnown RBP14.26□□□□□ -0.13
IRF3-214ENST00000596788 C2orf66Q6UXQ4 117 aa14.26□□□□□ -0.13
IRF3-214ENST00000596788 UBE2DNLQ8IWF7 75 aa14.26□□□□□ -0.13
IRF3-214ENST00000596788 TENM2Q9NT68 2774 aa14.26□□□□□ -0.13
IRF3-214ENST00000596788 UBE2L6O14933 153 aa14.25□□□□□ -0.13
IRF3-214ENST00000596788 FAM19A2Q8N3H0 131 aa14.25□□□□□ -0.13
IRF3-214ENST00000596788 Q8N3U1 123 aa14.25□□□□□ -0.13
IRF3-214ENST00000596788 UPK3BQ9BT76 320 aa14.25□□□□□ -0.13
IRF3-214ENST00000596788 CYSLTR1Q9Y271 337 aa14.25□□□□□ -0.13
IRF3-214ENST00000596788 HBDP02042 147 aa14.24□□□□□ -0.13
IRF3-214ENST00000596788 H7C423 109 aa14.23□□□□□ -0.13
IRF3-214ENST00000596788 FGF6P10767 208 aa14.23□□□□□ -0.13
IRF3-214ENST00000596788 TOMM6Q96B49 74 aa14.23□□□□□ -0.13
IRF3-214ENST00000596788 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
IRF3-214ENST00000596788 MPV17L2Q567V2 206 aa14.22□□□□□ -0.13
IRF3-214ENST00000596788 TMEM18Q96B42 140 aa14.22□□□□□ -0.13
IRF3-214ENST00000596788 ALMS1Q8TCU4 4167 aa14.21□□□□□ -0.13
IRF3-214ENST00000596788 VPS13DQ5THJ4 4388 aa14.21□□□□□ -0.13
IRF3-214ENST00000596788 TMEM262E9PQX1 116 aa14.21□□□□□ -0.13
IRF3-214ENST00000596788 S100A6P06703 90 aa14.21□□□□□ -0.13
IRF3-214ENST00000596788 MRPL52Q86TS9 123 aaKnown RBP14.21□□□□□ -0.13
IRF3-214ENST00000596788 G0S2P27469 103 aa14.2□□□□□ -0.14
IRF3-214ENST00000596788 PKIAP61925 76 aa14.2□□□□□ -0.14
IRF3-214ENST00000596788 RBX1P62877 108 aa14.2□□□□□ -0.14
IRF3-214ENST00000596788 PDZD11Q5EBL8 140 aa14.2□□□□□ -0.14
IRF3-214ENST00000596788 SIVA1O15304 175 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 DNAH10OSP0CZ25 163 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 AMMECR1LQ6DCA0 310 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 Q8N976 141 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 TIMM21Q9BVV7 248 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 SPANXA1Q9NS26 97 aa14.19□□□□□ -0.14
IRF3-214ENST00000596788 IGLV4-60A0A075B6I1 120 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 IGIPA6NJ69 53 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 IGHV3-30P01768 117 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 IGHV3-33P01772 117 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 IGHV3-30-3P0DP02 117 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 IGHV3-30-5P0DP03 117 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
IRF3-214ENST00000596788 LINC01556Q5JQF7 62 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 LGALS9CQ6DKI2 356 aa14.18□□□□□ -0.14
IRF3-214ENST00000596788 A0A087WX48 190 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 SNRPEP62304 92 aaKnown RBP14.17□□□□□ -0.14
IRF3-214ENST00000596788 Q6ZUT4 128 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 HIST3H2BBQ8N257 126 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 LINC00476Q8WZB0 136 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 FAM104AQ969W3 186 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 SCGB3A1Q96QR1 104 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 PYGO1Q9Y3Y4 419 aa14.17□□□□□ -0.14
IRF3-214ENST00000596788 LYSTQ99698 3801 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 DNAH1Q9P2D7 4330 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 A0A1B0GUV1 79 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 C5orf52A6NGY3 159 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 LINC01549A6NIU2 74 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 SMAGPQ0VAQ4 97 aa14.16□□□□□ -0.14
IRF3-214ENST00000596788 LINC00173Q6ZV60 143 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms