RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
ZNF558-204ENST00000596172 A0A1B0GUV1 79 aa12.17□□□□□ -0.46
ZNF558-204ENST00000596172 RBX1P62877 108 aa12.17□□□□□ -0.46
ZNF558-204ENST00000596172 GAGE6Q13070 117 aa12.17□□□□□ -0.46
ZNF558-204ENST00000596172 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
ZNF558-204ENST00000596172 LRCOL1A6NCL2 159 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 I3L3M4 83 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 RPS10P46783 165 aaKnown RBP12.16□□□□□ -0.46
ZNF558-204ENST00000596172 AMTP48728 403 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
ZNF558-204ENST00000596172 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
ZNF558-204ENST00000596172 Q8N976 141 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 PGPEP1Q9NXJ5 209 aa12.16□□□□□ -0.46
ZNF558-204ENST00000596172 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 ANGP03950 147 aaKnown RBP12.15□□□□□ -0.46
ZNF558-204ENST00000596172 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 MRPL51Q4U2R6 128 aaKnown RBP12.15□□□□□ -0.46
ZNF558-204ENST00000596172 ENHOQ6UWT2 76 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 NRACQ8N912 160 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 IMMP2LQ96T52 175 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 PRR34Q9NV39 138 aa12.15□□□□□ -0.46
ZNF558-204ENST00000596172 PMCHP20382 165 aa12.14□□□□□ -0.47
ZNF558-204ENST00000596172 C10orf91Q5T1B1 145 aa12.14□□□□□ -0.47
ZNF558-204ENST00000596172 CTDSP1Q9GZU7 261 aa12.14□□□□□ -0.47
ZNF558-204ENST00000596172 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
ZNF558-204ENST00000596172 DNAH5Q8TE73 4624 aa12.14□□□□□ -0.47
ZNF558-204ENST00000596172 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
ZNF558-204ENST00000596172 C16orf90A8MZG2 172 aa12.13□□□□□ -0.47
ZNF558-204ENST00000596172 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
ZNF558-204ENST00000596172 H7C423 109 aa12.13□□□□□ -0.47
ZNF558-204ENST00000596172 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
ZNF558-204ENST00000596172 VCYO14598 125 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 UBE2L6O14933 153 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 CRPP02741 224 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 APCSP02743 223 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 CKS2P33552 79 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 SUMO2P61956 95 aaKnown RBP12.12□□□□□ -0.47
ZNF558-204ENST00000596172 MIAQ16674 131 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 CDPF1Q6NVV7 123 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
ZNF558-204ENST00000596172 KIAA1109Q2LD37 5005 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 TSHBP01222 138 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 PPBPP02775 128 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 LINC00269Q8N2A0 174 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 MAPKAPK5-AS1Q8N8E1 139 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 C20orf203Q8NBC4 194 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 C20orf78Q9BR46 151 aa12.11□□□□□ -0.47
ZNF558-204ENST00000596172 ESDP10768 282 aa12.1□□□□□ -0.47
ZNF558-204ENST00000596172 RPL32P62910 135 aaKnown RBP12.1□□□□□ -0.47
ZNF558-204ENST00000596172 C1orf43Q9BWL3 253 aa12.1□□□□□ -0.47
ZNF558-204ENST00000596172 TMEM242Q9NWH2 141 aa12.1□□□□□ -0.47
ZNF558-204ENST00000596172 CARHSP1Q9Y2V2 147 aaKnown RBP12.1□□□□□ -0.47
ZNF558-204ENST00000596172 IGLV4-60A0A075B6I1 120 aa12.09□□□□□ -0.47
ZNF558-204ENST00000596172 PHOX2AO14813 284 aa12.09□□□□□ -0.47
ZNF558-204ENST00000596172 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
ZNF558-204ENST00000596172 D6R8Y8 96 aa12.08□□□□□ -0.48
ZNF558-204ENST00000596172 Q8N814 137 aa12.08□□□□□ -0.48
ZNF558-204ENST00000596172 NTN5Q8WTR8 489 aaPredicted RBP12.08□□□□□ -0.48
ZNF558-204ENST00000596172 HERC2O95714 4834 aa12.08□□□□□ -0.48
ZNF558-204ENST00000596172 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
ZNF558-204ENST00000596172 REG3AQ06141 175 aa12.07□□□□□ -0.48
ZNF558-204ENST00000596172 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
ZNF558-204ENST00000596172 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.06□□□□□ -0.48
ZNF558-204ENST00000596172 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
ZNF558-204ENST00000596172 IGKV2-29A2NJV5 120 aaPredicted RBP12.06□□□□□ -0.48
ZNF558-204ENST00000596172 FGF6P10767 208 aa12.06□□□□□ -0.48
ZNF558-204ENST00000596172 ZNF25P17030 456 aaPredicted RBP12.06□□□□□ -0.48
ZNF558-204ENST00000596172 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
ZNF558-204ENST00000596172 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
ZNF558-204ENST00000596172 C7orf77A4D0Y5 90 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 TCAPO15273 167 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 WFDC2Q14508 124 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 RHEBQ15382 184 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 TMEM136Q6ZRR5 245 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 BAALCQ8WXS3 180 aa12.05□□□□□ -0.48
ZNF558-204ENST00000596172 FCER1GP30273 86 aa12.04□□□□□ -0.48
ZNF558-204ENST00000596172 CLPSL2Q6UWE3 100 aa12.04□□□□□ -0.48
ZNF558-204ENST00000596172 MRPL52Q86TS9 123 aaKnown RBP12.04□□□□□ -0.48
ZNF558-204ENST00000596172 CLRN3Q8NCR9 226 aa12.04□□□□□ -0.48
ZNF558-204ENST00000596172 LAMTOR2Q9Y2Q5 125 aa12.04□□□□□ -0.48
ZNF558-204ENST00000596172 RYR1P21817 5038 aa12.04□□□□□ -0.48
ZNF558-204ENST00000596172 NPYP01303 97 aa12.03□□□□□ -0.48
ZNF558-204ENST00000596172 RNASEKQ6P5S7 137 aaKnown RBP12.03□□□□□ -0.48
ZNF558-204ENST00000596172 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
ZNF558-204ENST00000596172 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
ZNF558-204ENST00000596172 PRSS47A8MTI9 375 aa12.02□□□□□ -0.49
ZNF558-204ENST00000596172 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
ZNF558-204ENST00000596172 S100PP25815 95 aa12.02□□□□□ -0.49
ZNF558-204ENST00000596172 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
ZNF558-204ENST00000596172 APOBP04114 4563 aaKnown RBP12.01□□□□□ -0.49
ZNF558-204ENST00000596172 IGLV5-52A0A0A0MRZ9 124 aa12.01□□□□□ -0.49
ZNF558-204ENST00000596172 LECT2O14960 151 aa12.01□□□□□ -0.49
ZNF558-204ENST00000596172 FUSP35637 526 aaKnown RBP eCLIP12.01□□□□□ -0.49
ZNF558-204ENST00000596172 SMAGPQ0VAQ4 97 aa12.01□□□□□ -0.49
ZNF558-204ENST00000596172 CSDC2Q9Y534 153 aaKnown RBP12.01□□□□□ -0.49
ZNF558-204ENST00000596172 GCSHP23434 173 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms